RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 PTPN7P35236 360 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 PREPLQ4J6C6 727 aaPredicted RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 TREML2Q5T2D2 321 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 IER5Q5VY09 327 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 CDR2LQ86X02 465 aaPredicted RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 TRPM4Q8TD43 1214 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 SLC16A10Q8TF71 515 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 TBC1D31Q96DN5 1066 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 THOC1Q96FV9 657 aaKnown RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 RXFP1Q9HBX9 757 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 BTBD7Q9P203 1132 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 POLIQ9UNA4 740 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 IGF2BP3O00425 579 aaKnown RBP eCLIP10.28□□□□□ -0.765e-7■■■■□ 20.7
SEC31A-227ENST00000508502 ZBTB7AO95365 584 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 KRT3P12035 628 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 ASPAP45381 313 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 RAP1GAPP47736 663 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 PTPN20Q4JDL3 420 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 NCAPG2Q86XI2 1143 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 TDRPQ86YL5 185 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 KIF2BQ8N4N8 673 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 TAB3Q8N5C8 712 aaPredicted RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 NIPA2Q8N8Q9 360 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 JOSD2Q8TAC2 188 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 MAGEC3Q8TD91 643 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 KLHL29Q96CT2 875 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 SMC6Q96SB8 1091 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 MAF1Q9H063 256 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 GGA3Q9NZ52 723 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 SHOC2Q9UQ13 582 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 ASMTLO95671 621 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 TNNC2P02585 160 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 KRT19P08727 400 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 HOXC6P09630 235 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 SLC8A1P32418 973 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 CDH5P33151 784 aaPredicted RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 OTUD4Q01804 1114 aaKnown RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 MGAT5Q09328 741 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 DNAJC3Q13217 504 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 SURF1Q15526 300 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 RHPN2Q8IUC4 686 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 CEP120Q8N960 986 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 SLC35B2Q8TB61 432 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 ACTL9Q8TC94 416 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 SPOCK2Q92563 424 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 PRCCQ92733 491 aaPredicted RBP10.28□□□□□ -0.76
SEC31A-227ENST00000508502 XYLT2Q9H1B5 865 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 UBN1Q9NPG3 1134 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 STRIP2Q9ULQ0 834 aa10.28□□□□□ -0.76
SEC31A-227ENST00000508502 C3orf70A6NLC5 250 aaPredicted RBP10.27□□□□□ -0.76
SEC31A-227ENST00000508502 CST8O60676 142 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 IL1R2P27930 398 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 POLR2BP30876 1174 aaKnown RBP10.27□□□□□ -0.76
SEC31A-227ENST00000508502 MAP2K2P36507 400 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 PSMC1P62191 440 aaKnown RBP10.27□□□□□ -0.76
SEC31A-227ENST00000508502 ORC1Q13415 861 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 HIF1AQ16665 826 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 CDCA2Q69YH5 1023 aaPredicted RBP10.27□□□□□ -0.76
SEC31A-227ENST00000508502 METTL7BQ6UX53 244 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 LBX2Q6XYB7 198 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 ECHDC2Q86YB7 292 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 GRAMD1AQ96CP6 724 aa10.27□□□□□ -0.76
SEC31A-227ENST00000508502 ABLIM1O14639 778 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 LRCH4O75427 683 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 GJB1P08034 283 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 EZRP15311 586 aaKnown RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 CA4P22748 312 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 RPA3P35244 121 aaPredicted RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 CTCFP49711 727 aaPredicted RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 GDF10P55107 478 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 YWHAEP62258 255 aaKnown RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 GAD2Q05329 585 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 SPARCL1Q14515 664 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 MXD4Q14582 209 aaPredicted RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 CCDC142Q17RM4 750 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 WLSQ5T9L3 541 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 POLNQ7Z5Q5 900 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 ARFGAP1Q8N6T3 406 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 EMC1Q8N766 993 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 ANKRD36BP1Q96IX9 119 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 FAM167AQ96KS9 214 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 NLRP4Q96MN2 994 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 SYNCQ9H7C4 482 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 CYTH4Q9UIA0 394 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 TRIM33Q9UPN9 1127 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 A0A1W2PPM1 405 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 SIGLEC16A6NMB1 481 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 INO80B-WBP1J3KQ70 363 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 FZD9O00144 591 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 PRPF4O43172 522 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■□□□ 12.3
SEC31A-227ENST00000508502 EDNRBP24530 442 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 HIRAP54198 1017 aaPredicted RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 CDH8P55286 799 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 SLC25A11Q02978 314 aaKnown RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 MTM1Q13496 603 aa10.27□□□□□ -0.77
SEC31A-227ENST00000508502 HADHQ16836 314 aaKnown RBP10.27□□□□□ -0.77
SEC31A-227ENST00000508502 ANKRD22Q5VYY1 191 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms