RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 WDR44Q5JSH3 913 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 SDHAF4Q5VUM1 108 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 GRAMD1CQ8IYS0 662 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 DCP1BQ8IZD4 617 aaKnown RBP17.43■□□□□ 0.38
LMNA-222ENST00000508500 SUMF1Q8NBK3 374 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 FAM200AQ8TCP9 573 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 KCNG4Q8TDN1 519 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 NELL2Q99435 816 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 ACBD6Q9BR61 282 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 PI4K2AQ9BTU6 479 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 SLC46A2Q9BY10 475 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 SMG9Q9H0W8 520 aaKnown RBP17.43■□□□□ 0.38
LMNA-222ENST00000508500 SPATA6Q9NWH7 488 aaPredicted RBP17.43■□□□□ 0.38
LMNA-222ENST00000508500 GTF3C4Q9UKN8 822 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 NDRG2Q9UN36 371 aaKnown RBP17.43■□□□□ 0.38
LMNA-222ENST00000508500 PCDHB5Q9Y5E4 795 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 SNX9Q9Y5X1 595 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 MYO16Q9Y6X6 1858 aa17.43■□□□□ 0.38
LMNA-222ENST00000508500 MYH10P35580 1976 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.42■□□□□ 0.38
LMNA-222ENST00000508500 CHADO15335 359 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 KLRC4O43908 158 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 HUS1O60921 280 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 CST3P01034 146 aaPredicted RBP17.42■□□□□ 0.38
LMNA-222ENST00000508500 F11P03951 625 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 PDIA4P13667 645 aaKnown RBP17.42■□□□□ 0.38
LMNA-222ENST00000508500 AFMP43652 599 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 RPS9P46781 194 aaKnown RBP17.42■□□□□ 0.38
LMNA-222ENST00000508500 ME1P48163 572 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 INTS6LQ5JSJ4 861 aaKnown RBP17.42■□□□□ 0.38
LMNA-222ENST00000508500 STXBP4Q6ZWJ1 553 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 NELFCDQ8IXH7 590 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 TMEM86AQ8N2M4 240 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 RDH13Q8NBN7 331 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 LEO1Q8WVC0 666 aaPredicted RBP17.42■□□□□ 0.38
LMNA-222ENST00000508500 KBTBD7Q8WVZ9 684 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 E2F7Q96AV8 911 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 ANKRD36BP1Q96IX9 119 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 ZFYVE19Q96K21 471 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 TASP1Q9H6P5 420 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 SERTAD1Q9UHV2 236 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 NME7Q9Y5B8 376 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 PIAS3Q9Y6X2 628 aa17.42■□□□□ 0.38
LMNA-222ENST00000508500 MYBPHLA2RUH7 354 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 ATP2C2O75185 946 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 PRPF40AO75400 957 aaKnown RBP17.41■□□□□ 0.38
LMNA-222ENST00000508500 HSP90AA1P07900 732 aaKnown RBP17.41■□□□□ 0.38
LMNA-222ENST00000508500 CYP2F1P24903 491 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 LMO2P25791 158 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 WEE1P30291 646 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 MAGEA9P43362 315 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 SOX9P48436 509 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 TSPY1Q01534 308 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 VEPH1Q14D04 833 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 DDR2Q16832 855 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 ATL3Q6DD88 541 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 TSSK4Q6SA08 328 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 ADGRF2Q8IZF7 708 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 TOP6BLQ8N6T0 577 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 FAM3CQ92520 227 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 ZNF516Q92618 1163 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 NELL1Q92832 810 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 RMDN1Q96DB5 314 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 MAGEF1Q9HAY2 307 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 SLC39A2Q9NP94 309 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 FBXO4Q9UKT5 387 aa17.41■□□□□ 0.38
LMNA-222ENST00000508500 MYOFQ9NZM1 2061 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 MAN2B1O00754 1011 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 LAMTOR5O43504 91 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 ACTN4O43707 911 aaKnown RBP17.4■□□□□ 0.38
LMNA-222ENST00000508500 TADA3O75528 432 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 FGF19O95750 216 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 CCNE1P24864 410 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 CDC25CP30307 473 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 NLRP12P59046 1061 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 CSTF1Q05048 431 aaKnown RBP17.4■□□□□ 0.38
LMNA-222ENST00000508500 MTAPQ13126 283 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 SURF1Q15526 300 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 SNRNP35Q16560 246 aaKnown RBP17.4■□□□□ 0.38
LMNA-222ENST00000508500 NFE2Q16621 373 aaPredicted RBP17.4■□□□□ 0.38
LMNA-222ENST00000508500 DUOXA2Q1HG44 320 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 BMT2Q1RMZ1 405 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 ZNF528Q3MIS6 628 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 ARHGAP15Q53QZ3 475 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 FAM171BQ6P995 826 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 TXNDC11Q6PKC3 985 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 TRAPPC11Q7Z392 1133 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 WDR49Q8IV35 697 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 TTC8Q8TAM2 541 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 RIN3Q8TB24 985 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 HPDLQ96IR7 371 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 OBP2AQ9NY56 170 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 GTSE1Q9NYZ3 720 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 CFAP45Q9UL16 551 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 MRPS17Q9Y2R5 130 aaKnown RBP17.4■□□□□ 0.38
LMNA-222ENST00000508500 UBE4BO95155 1302 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 KIAA1549LQ6ZVL6 1849 aa17.4■□□□□ 0.38
LMNA-222ENST00000508500 EML5Q05BV3 1969 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms