RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 TPGS2Q68CL5 300 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 ARHGAP17Q68EM7 881 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 IRF2BP2Q7Z5L9 587 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 SLC4A11Q8NBS3 891 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 OR8K1Q8NGG5 319 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 ANP32BQ92688 251 aaKnown RBP9.21□□□□□ -0.94
USP46-207ENST00000508499 RABGGTAQ92696 567 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 KAT5Q92993 513 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 TMEM176AQ96HP8 235 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 FUBP3Q96I24 572 aaKnown RBP eCLIP9.21□□□□□ -0.94
USP46-207ENST00000508499 PCMTD1Q96MG8 357 aaPredicted RBP9.21□□□□□ -0.94
USP46-207ENST00000508499 SPAG5Q96R06 1193 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 PANX2Q96RD6 677 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 MRPL45Q9BRJ2 306 aaKnown RBP9.21□□□□□ -0.94
USP46-207ENST00000508499 ZCWPW1Q9H0M4 648 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 ABCB6Q9NP58 842 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 TLR9Q9NR96 1032 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 DDX43Q9NXZ2 648 aaKnown RBP9.21□□□□□ -0.94
USP46-207ENST00000508499 AJAP1Q9UKB5 411 aaPredicted RBP9.21□□□□□ -0.94
USP46-207ENST00000508499 NME7Q9Y5B8 376 aa9.21□□□□□ -0.94
USP46-207ENST00000508499 A8MXQ7 604 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 RNF225M0QZC1 329 aaPredicted RBP9.2□□□□□ -0.94
USP46-207ENST00000508499 GFPT2O94808 682 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 ABLIM3O94929 683 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 URODP06132 367 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 VDRP11473 427 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 CLCN1P35523 988 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 NDST1P52848 882 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 CDH8P55286 799 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 PTK2Q05397 1052 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 LRMPQ12912 555 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 RAB33AQ14088 237 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 SMC1AQ14683 1233 aaKnown RBP9.2□□□□□ -0.94
USP46-207ENST00000508499 PTPN14Q15678 1187 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 NFE2Q16621 373 aaPredicted RBP9.2□□□□□ -0.94
USP46-207ENST00000508499 CFAP221Q4G0U5 840 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 INTS6LQ5JSJ4 861 aaKnown RBP9.2□□□□□ -0.94
USP46-207ENST00000508499 GJB7Q6PEY0 223 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 TMEM270Q6UE05 265 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 TAS1R1Q7RTX1 841 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 TMC6Q7Z403 805 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 PPFIBP1Q86W92 1011 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 VPS52Q8N1B4 723 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 MRPL43Q8N983 215 aaKnown RBP9.2□□□□□ -0.94
USP46-207ENST00000508499 TC2NQ8N9U0 490 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 B3GALNT2Q8NCR0 500 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 MYCBPAPQ8TBZ2 947 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 EPS8L1Q8TE68 723 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 HASPINQ8TF76 798 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 NKX2-4Q9H2Z4 354 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 MRPL17Q9NRX2 175 aaKnown RBP9.2□□□□□ -0.94
USP46-207ENST00000508499 ABHD10Q9NUJ1 306 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 PCDHGC3Q9UN70 934 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
USP46-207ENST00000508499 ZNF638Q14966 1978 aaKnown RBP9.2□□□□□ -0.94
USP46-207ENST00000508499 DENND4CQ5VZ89 1909 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 SSU72P8A0A1W2PR75 194 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 LRRC53A6NM62 1247 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 AKR1B15C9JRZ8 316 aaPredicted RBP9.19□□□□□ -0.94
USP46-207ENST00000508499 I3L4J1 428 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 LPXNO60711 386 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 PTPN1P18031 435 aaKnown RBP9.19□□□□□ -0.94
USP46-207ENST00000508499 LMO2P25791 158 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 KRT9P35527 623 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 NDUFV1P49821 464 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 TSPY1Q01534 308 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 GPM6BQ13491 265 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 RAPGEF1Q13905 1077 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 CNGA2Q16280 664 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 PSMD5Q16401 504 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 ARHGAP44Q17R89 818 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 SFMBT2Q5VUG0 894 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 HGSNATQ68CP4 663 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 KIAA1841Q6NSI8 718 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 OSTM1Q86WC4 334 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 DCP1BQ8IZD4 617 aaKnown RBP9.19□□□□□ -0.94
USP46-207ENST00000508499 RBBP8NLQ8NC74 664 aaPredicted RBP9.19□□□□□ -0.94
USP46-207ENST00000508499 OR6B3Q8NGW1 331 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 OR10T2Q8NGX3 314 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 ZNF461Q8TAF7 563 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 HDAC7Q8WUI4 952 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 POF1BQ8WVV4 589 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 DDX1Q92499 740 aaKnown RBP9.19□□□□□ -0.94
USP46-207ENST00000508499 TWNKQ96RR1 684 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 PPP1R9BQ96SB3 815 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 HNRNPABQ99729 332 aaKnown RBP9.19□□□□□ -0.94
USP46-207ENST00000508499 SYT15Q9BQS2 421 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 CLSTN3Q9BQT9 956 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 UBXN6Q9BZV1 441 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 ELOVL4Q9GZR5 314 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 LHX5Q9H2C1 402 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 ZNF576Q9H609 170 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 CSNK1G1Q9HCP0 422 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 PNPLA8Q9NP80 782 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 NLRC4Q9NPP4 1024 aa9.19□□□□□ -0.94
USP46-207ENST00000508499 NOCTQ9UK39 431 aaKnown RBP9.19□□□□□ -0.94
USP46-207ENST00000508499 PCDHB4Q9Y5E5 795 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms