RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 JPH2Q9BR39 696 aaPredicted RBP15.3■□□□□ 0.04
DDX41-208ENST00000507955 TMEM121Q9BTD3 319 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 FAM129AQ9BZQ8 928 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 ELOVL4Q9GZR5 314 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 PDZD7Q9H5P4 517 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 ZNF148Q9UQR1 794 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 ATP2C2O75185 946 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 CALB1P05937 261 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 POLR2BP30876 1174 aaKnown RBP15.3■□□□□ 0.04
DDX41-208ENST00000507955 NRLP54845 237 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 PLCB3Q01970 1234 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 CCNG2Q16589 344 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 PPP1R15BQ5SWA1 713 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 SH3PXD2AQ5TCZ1 1133 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 IZUMO3Q5VZ72 239 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 CACNA2D3Q8IZS8 1091 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 NLRP7Q8WX94 980 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 TNFSF13BQ9Y275 285 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 PDHXO00330 501 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 ERBB2P04626 1255 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 GRM1Q13255 1194 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 CYP4F22Q6NT55 531 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 CYP4X1Q8N118 509 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 C12orf29Q8N999 325 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 SLC4A11Q8NBS3 891 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 PGM2Q96G03 612 aa15.3■□□□□ 0.04
DDX41-208ENST00000507955 PIWIL1Q96J94 861 aaKnown RBP15.3■□□□□ 0.04
DDX41-208ENST00000507955 ADCY6O43306 1168 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 GAS2O43903 313 aaKnown RBP15.29■□□□□ 0.04
DDX41-208ENST00000507955 BANF1O75531 89 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 GRAP2O75791 330 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 PIAS1O75925 651 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 IFNB1P01574 187 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 KRT3P12035 628 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 PSMA2P25787 234 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 MMP13P45452 471 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 PSMC1P62191 440 aaKnown RBP15.29■□□□□ 0.04
DDX41-208ENST00000507955 SNAPC2Q13487 334 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 DPY19L2Q6NUT2 758 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 SPOCD1Q6ZMY3 1216 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 CPLX4Q7Z7G2 160 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 EXOC3L1Q86VI1 746 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 CXorf38Q8TB03 319 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 UPF1Q92900 1129 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDX41-208ENST00000507955 CHMP6Q96FZ7 201 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 RUNDC3BQ96NL0 473 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 PRMT1Q99873 361 aaKnown RBP15.29■□□□□ 0.04
DDX41-208ENST00000507955 C16orf70Q9BSU1 422 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 METTL5Q9NRN9 209 aaKnown RBP15.29■□□□□ 0.04
DDX41-208ENST00000507955 KLC4Q9NSK0 619 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 HES2Q9Y543 173 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 GOLGA6L7A0A1B0GV03 622 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 GOLGA8MH3BSY2 632 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 LIASO43766 372 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 EIF4BP23588 611 aaKnown RBP15.29■□□□□ 0.04
DDX41-208ENST00000507955 KLRC2P26717 231 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 GAD2Q05329 585 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 FASTKD3Q14CZ7 662 aaKnown RBP15.29■□□□□ 0.04
DDX41-208ENST00000507955 KIZQ2M2Z5 673 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 ILDR2Q71H61 639 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 CCT6BQ92526 530 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 LPIN3Q9BQK8 851 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 TRAIPQ9BWF2 469 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 SYNCQ9H7C4 482 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 CNOT10Q9H9A5 744 aaKnown RBP15.29■□□□□ 0.04
DDX41-208ENST00000507955 HAUS2Q9NVX0 235 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 NINJ2Q9NZG7 142 aa15.29■□□□□ 0.04
DDX41-208ENST00000507955 SNAI1O95863 264 aaPredicted RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 GBP1P32455 592 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 SCTRP47872 440 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 ZNF792Q3KQV3 632 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 C6orf118Q5T5N4 469 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 GKAP1Q5VSY0 366 aaPredicted RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.28■□□□□ 0.04
DDX41-208ENST00000507955 ARMC9Q7Z3E5 817 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 GRK7Q8WTQ7 553 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 MRRFQ96E11 262 aaKnown RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 ASB14A6NK59 587 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 BTBD19C9JJ37 291 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 H3BRB1 525 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 PPEF2O14830 753 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 LRCH4O75427 683 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 LSM8O95777 96 aaKnown RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 TTC4O95801 387 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 PHKA2P46019 1235 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 ARSEP51690 589 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 PRAMEF19Q5SWL8 479 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 RCOR2Q8IZ40 523 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 MAIP1Q8WWC4 291 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 CENPTQ96BT3 561 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 LENG1Q96BZ8 264 aaPredicted RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 HEXIM2Q96MH2 286 aaKnown RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 FAM49AQ9H0Q0 323 aaPredicted RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 TUT1Q9H6E5 874 aaKnown RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 CDHR5Q9HBB8 845 aa15.28■□□□□ 0.04
DDX41-208ENST00000507955 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.28■□□□□ 0.04
DDX41-208ENST00000507955 PCDHGC3Q9UN70 934 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms