RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CBLBQ13191 982 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 THOC5Q13769 683 aaKnown RBP18.64■□□□□ 0.58
NUP54-205ENST00000507257 TBCCQ15814 346 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 SPOCD1Q6ZMY3 1216 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 MYLK4Q86YV6 388 aaPredicted RBP18.64■□□□□ 0.58
NUP54-205ENST00000507257 C4orf19Q8IY42 314 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 KBTBD2Q8IY47 623 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 APOPT1Q96IL0 206 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 TOPORSQ9NS56 1045 aaPredicted RBP18.64■□□□□ 0.58
NUP54-205ENST00000507257 KCNK4Q9NYG8 393 aa18.64■□□□□ 0.58
NUP54-205ENST00000507257 hCG_1818297A0A087WSY0 165 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 CAPN14A8MX76 684 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 FCHO1O14526 889 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 HNRNPDQ14103 355 aaKnown RBP18.64■□□□□ 0.57
NUP54-205ENST00000507257 TFDP1Q14186 410 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 C6orf163Q5TEZ5 329 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 MFSD7Q6UXD7 560 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 ARHGAP22Q7Z5H3 698 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 NAT8LQ8N9F0 302 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 SPIRE2Q8WWL2 714 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 C11orf70Q9BRQ4 267 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 NTPCRQ9BSD7 190 aaKnown RBP18.64■□□□□ 0.57
NUP54-205ENST00000507257 PPP1R12CQ9BZL4 782 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 ZC3H12CQ9C0D7 883 aaKnown RBP18.64■□□□□ 0.57
NUP54-205ENST00000507257 C17orf75Q9HAS0 396 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 FBXO6Q9NRD1 293 aaPredicted RBP18.64■□□□□ 0.57
NUP54-205ENST00000507257 DDX56Q9NY93 547 aaKnown RBP18.64■□□□□ 0.57
NUP54-205ENST00000507257 STRIP2Q9ULQ0 834 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
NUP54-205ENST00000507257 IQANK1A0A1B0GTG1 560 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 ANPEPP15144 967 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 GARTP22102 1010 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 YWHABP31946 246 aaKnown RBP18.63■□□□□ 0.57
NUP54-205ENST00000507257 ACTR3P61158 418 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 DSG1Q02413 1049 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 DNAL1Q4LDG9 190 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 LLGL2Q6P1M3 1020 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 SH2D5Q6ZV89 423 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 LRRC6Q86X45 466 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 GPD1LQ8N335 351 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 FAM210AQ96ND0 272 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 OLFM3Q96PB7 478 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 HAPLN3Q96S86 360 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 METTL5Q9NRN9 209 aaKnown RBP18.63■□□□□ 0.57
NUP54-205ENST00000507257 ANKEF1Q9NU02 776 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 PCMTD2Q9NV79 361 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 ZDHHC7Q9NXF8 308 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 SLC17A7Q9P2U7 560 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
NUP54-205ENST00000507257 LPXNO60711 386 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 TM7SF2O76062 418 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 KRT1P04264 644 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 KRT10P13645 584 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 ETS1P14921 441 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 ITGB5P18084 799 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 ACO1P21399 889 aaKnown RBP18.62■□□□□ 0.57
NUP54-205ENST00000507257 GSTT1P30711 240 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 SERPINB4P48594 390 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 FKBP1AP62942 108 aaKnown RBP18.62■□□□□ 0.57
NUP54-205ENST00000507257 NOP14P78316 857 aaKnown RBP18.62■□□□□ 0.57
NUP54-205ENST00000507257 TFDP3Q5H9I0 405 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 TMCO4Q5TGY1 634 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 KYAT3Q6YP21 454 aaKnown RBP18.62■□□□□ 0.57
NUP54-205ENST00000507257 TRIM42Q8IWZ5 723 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 DTX3LQ8TDB6 740 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 EZH1Q92800 747 aaPredicted RBP18.62■□□□□ 0.57
NUP54-205ENST00000507257 PPP2R3CQ969Q6 453 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 EPAS1Q99814 870 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 C1orf21Q9H246 121 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 WDR91A4D1P6 747 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 TMEM191CA6NGB0 347 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
NUP54-205ENST00000507257 RIMBP2O15034 1052 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 FKBP6O75344 327 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 SERPINB2P05120 415 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 TMEM191BP0C7N4 346 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 SSR1P43307 286 aaKnown RBP18.62■□□□□ 0.57
NUP54-205ENST00000507257 CDK7P50613 346 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 AP2B1P63010 937 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 UBXN2AP68543 259 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 WDR44Q5JSH3 913 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 AAGABQ6PD74 315 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 C3orf62Q6ZUJ4 267 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 CCNJLQ8IV13 435 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 STKLD1Q8NE28 680 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 C7orf26Q96N11 449 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 CYTH2Q99418 400 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 ECSITQ9BQ95 431 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 CENPKQ9BS16 269 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 SPATA16Q9BXB7 569 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 KCNH7Q9NS40 1196 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 PLA2G4CQ9UP65 541 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 USTQ9Y2C2 406 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 PPME1Q9Y570 386 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 COMMD3-BMI1R4GMX3 469 aa18.62■□□□□ 0.57
NUP54-205ENST00000507257 CSDE1O75534 798 aaKnown RBP18.61■□□□□ 0.57
NUP54-205ENST00000507257 CIB2O75838 187 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 GDF11O95390 407 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 MT-ND3P03897 115 aa18.61■□□□□ 0.57
NUP54-205ENST00000507257 MYL2P10916 166 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms