RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 URODP06132 367 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 CTSAP10619 480 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 CD19P15391 556 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 CHRNB2P17787 502 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 PTPN1P18031 435 aaKnown RBP15.09■□□□□ 0.01
RNF4-208ENST00000507247 RPL17P18621 184 aaKnown RBP15.09■□□□□ 0.01
RNF4-208ENST00000507247 FECHP22830 423 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 SSTR3P32745 418 aaPredicted RBP15.09■□□□□ 0.01
RNF4-208ENST00000507247 PDE6CP51160 858 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 CDR1P51861 262 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 ERVFC1P60507 584 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 PTK2Q05397 1052 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 KLHL30Q0D2K2 578 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 GPM6BQ13491 265 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 CAMK1Q14012 370 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 PTPN14Q15678 1187 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 MDH1BQ5I0G3 518 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 TAF3Q5VWG9 929 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 KIAA1841Q6NSI8 718 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 LRRTM3Q86VH5 581 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 TNIP3Q96KP6 325 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 CHP1Q99653 195 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 ZCWPW1Q9H0M4 648 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 SLC28A3Q9HAS3 691 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 FAM49BQ9NUQ9 324 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 TMLHEQ9NVH6 421 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 PUF60Q9UHX1 559 aaKnown RBP15.09■□□□□ 0.01
RNF4-208ENST00000507247 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
RNF4-208ENST00000507247 OR6C75A6NL08 312 aa15.08■□□□□ 0
RNF4-208ENST00000507247 THAP12O43422 761 aa15.08■□□□□ 0
RNF4-208ENST00000507247 SERPING1P05155 500 aa15.08■□□□□ 0
RNF4-208ENST00000507247 MMEP08473 750 aa15.08■□□□□ 0
RNF4-208ENST00000507247 CFHP08603 1231 aa15.08■□□□□ 0
RNF4-208ENST00000507247 VDRP11473 427 aa15.08■□□□□ 0
RNF4-208ENST00000507247 CCDC130P13994 396 aa15.08■□□□□ 0
RNF4-208ENST00000507247 BPIFB4P59827 614 aa15.08■□□□□ 0
RNF4-208ENST00000507247 UBE3AQ05086 875 aa15.08■□□□□ 0
RNF4-208ENST00000507247 TSR1Q2NL82 804 aaKnown RBP15.08■□□□□ 0
RNF4-208ENST00000507247 SGO2Q562F6 1265 aa15.08■□□□□ 0
RNF4-208ENST00000507247 TDRD12Q587J7 1177 aaKnown RBP15.08■□□□□ 0
RNF4-208ENST00000507247 PPP1R26Q5T8A7 1209 aaPredicted RBP15.08■□□□□ 0
RNF4-208ENST00000507247 FAM171BQ6P995 826 aa15.08■□□□□ 0
RNF4-208ENST00000507247 ZNF571Q7Z3V5 609 aaPredicted RBP15.08■□□□□ 0
RNF4-208ENST00000507247 FMNL3Q8IVF7 1028 aa15.08■□□□□ 0
RNF4-208ENST00000507247 ZNF606Q8WXB4 792 aa15.08■□□□□ 0
RNF4-208ENST00000507247 ARNTL2Q8WYA1 636 aa15.08■□□□□ 0
RNF4-208ENST00000507247 CLSTN3Q9BQT9 956 aa15.08■□□□□ 0
RNF4-208ENST00000507247 STK39Q9UEW8 545 aa15.08■□□□□ 0
RNF4-208ENST00000507247 GTF3C4Q9UKN8 822 aa15.08■□□□□ 0
RNF4-208ENST00000507247 PCDHGC5Q9Y5F6 944 aa15.08■□□□□ 0
RNF4-208ENST00000507247 BACE2Q9Y5Z0 518 aa15.08■□□□□ 0
RNF4-208ENST00000507247 CDY1Q9Y6F8 540 aa15.08■□□□□ 0
RNF4-208ENST00000507247 O00370 1275 aa15.07■□□□□ 0
RNF4-208ENST00000507247 FSCN2O14926 492 aa15.07■□□□□ 0
RNF4-208ENST00000507247 PTMAP06454 111 aaKnown RBP15.07■□□□□ 0
RNF4-208ENST00000507247 CCDC172P0C7W6 258 aa15.07■□□□□ 0
RNF4-208ENST00000507247 IRS1P35568 1242 aa15.07■□□□□ 0
RNF4-208ENST00000507247 CDK17Q00537 523 aa15.07■□□□□ 0
RNF4-208ENST00000507247 TSPY1Q01534 308 aa15.07■□□□□ 0
RNF4-208ENST00000507247 FMO1Q01740 532 aa15.07■□□□□ 0
RNF4-208ENST00000507247 PLPP4Q5VZY2 271 aa15.07■□□□□ 0
RNF4-208ENST00000507247 ARHGAP17Q68EM7 881 aa15.07■□□□□ 0
RNF4-208ENST00000507247 PAQR9Q6ZVX9 377 aa15.07■□□□□ 0
RNF4-208ENST00000507247 TMC7Q7Z402 723 aa15.07■□□□□ 0
RNF4-208ENST00000507247 GLYCTKQ8IVS8 523 aa15.07■□□□□ 0
RNF4-208ENST00000507247 LRRC8AQ8IWT6 810 aa15.07■□□□□ 0
RNF4-208ENST00000507247 GPR65Q8IYL9 337 aa15.07■□□□□ 0
RNF4-208ENST00000507247 DEFB123Q8N688 67 aa15.07■□□□□ 0
RNF4-208ENST00000507247 MYCBPAPQ8TBZ2 947 aa15.07■□□□□ 0
RNF4-208ENST00000507247 GDPD5Q8WTR4 605 aa15.07■□□□□ 0
RNF4-208ENST00000507247 MYLPFQ96A32 169 aa15.07■□□□□ 0
RNF4-208ENST00000507247 PCED1BQ96HM7 432 aa15.07■□□□□ 0
RNF4-208ENST00000507247 TCF25Q9BQ70 676 aa15.07■□□□□ 0
RNF4-208ENST00000507247 B3GNT5Q9BYG0 378 aa15.07■□□□□ 0
RNF4-208ENST00000507247 ENTPD7Q9NQZ7 604 aa15.07■□□□□ 0
RNF4-208ENST00000507247 TLR9Q9NR96 1032 aa15.07■□□□□ 0
RNF4-208ENST00000507247 MRPL17Q9NRX2 175 aaKnown RBP15.07■□□□□ 0
RNF4-208ENST00000507247 ZNHIT6Q9NWK9 470 aaKnown RBP15.07■□□□□ 0
RNF4-208ENST00000507247 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.07■□□□□ 06e-6■■■■■ 55.1
RNF4-208ENST00000507247 PATJQ8NI35 1801 aa15.06■□□□□ 0
RNF4-208ENST00000507247 CLDN5O00501 218 aa15.06■□□□□ 0
RNF4-208ENST00000507247 MICAL2O94851 1124 aa15.06■□□□□ 0
RNF4-208ENST00000507247 VNN2O95498 520 aa15.06■□□□□ 0
RNF4-208ENST00000507247 CXCL14O95715 111 aa15.06■□□□□ 0
RNF4-208ENST00000507247 ADORA2BP29275 332 aa15.06■□□□□ 0
RNF4-208ENST00000507247 OR1D2P34982 312 aa15.06■□□□□ 0
RNF4-208ENST00000507247 EIF4A3P38919 411 aaKnown RBP15.06■□□□□ 0
RNF4-208ENST00000507247 ARPP19P56211 112 aa15.06■□□□□ 0
RNF4-208ENST00000507247 CCZ1BP86790 482 aa15.06■□□□□ 0
RNF4-208ENST00000507247 CCZ1P86791 482 aaPredicted RBP15.06■□□□□ 0
RNF4-208ENST00000507247 CDR2Q01850 454 aa15.06■□□□□ 0
RNF4-208ENST00000507247 ROR1Q01973 937 aa15.06■□□□□ 0
RNF4-208ENST00000507247 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
RNF4-208ENST00000507247 SLC39A12Q504Y0 691 aa15.06■□□□□ 0
RNF4-208ENST00000507247 SLC8B1Q6J4K2 584 aa15.06■□□□□ 0
RNF4-208ENST00000507247 PALB2Q86YC2 1186 aa15.06■□□□□ 0
RNF4-208ENST00000507247 DCP1BQ8IZD4 617 aaKnown RBP15.06■□□□□ 0
RNF4-208ENST00000507247 FUKQ8N0W3 1084 aa15.06■□□□□ 0
RNF4-208ENST00000507247 SLC2A14Q8TDB8 520 aa15.06■□□□□ 0
RNF4-208ENST00000507247 CYFIP2Q96F07 1278 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms