RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PHF7Q9BWX1 381 aaPredicted RBP19.42■□□□□ 0.7
NPHP4-210ENST00000506941 SAMSN1Q9NSI8 373 aaKnown RBP19.42■□□□□ 0.7
NPHP4-210ENST00000506941 ABI2Q9NYB9 513 aaPredicted RBP19.42■□□□□ 0.7
NPHP4-210ENST00000506941 PRKAG3Q9UGI9 489 aa19.42■□□□□ 0.7
NPHP4-210ENST00000506941 HMGXB4Q9UGU5 601 aa19.42■□□□□ 0.7
NPHP4-210ENST00000506941 N4BP1O75113 896 aaKnown RBP19.41■□□□□ 0.7
NPHP4-210ENST00000506941 XYLBO75191 536 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 LRG1P02750 347 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 AFPP02771 609 aaKnown RBP19.41■□□□□ 0.7
NPHP4-210ENST00000506941 SP100P23497 879 aaPredicted RBP19.41■□□□□ 0.7
NPHP4-210ENST00000506941 NTHL1P78549 312 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 SMARCB1Q12824 385 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 GRASPQ7Z6J2 395 aaPredicted RBP19.41■□□□□ 0.7
NPHP4-210ENST00000506941 CREBRFQ8IUR6 639 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 ADHFE1Q8IWW8 467 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 CCDC150Q8NCX0 1101 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 LMO3Q8TAP4 145 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 ENOX1Q8TC92 643 aaKnown RBP19.41■□□□□ 0.7
NPHP4-210ENST00000506941 SPPL2BQ8TCT7 592 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 C2orf15Q8WU43 125 aaKnown RBP19.41■□□□□ 0.7
NPHP4-210ENST00000506941 ARID3AQ99856 593 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 PIDD1Q9HB75 910 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 WDR6Q9NNW5 1121 aaKnown RBP19.41■□□□□ 0.7
NPHP4-210ENST00000506941 CEP72Q9P209 647 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 HSFX1Q9UBD0 423 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 NFE2L3Q9Y4A8 694 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 PCDHB5Q9Y5E4 795 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 CLUHO75153 1309 aa19.41■□□□□ 0.7
NPHP4-210ENST00000506941 MYO16Q9Y6X6 1858 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 A8MXQ7 604 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 INCA1Q0VD86 236 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 ORC1Q13415 861 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 NFE2Q16621 373 aaPredicted RBP19.4■□□□□ 0.7
NPHP4-210ENST00000506941 MDH1BQ5I0G3 518 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 MYLPFQ96A32 169 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 UHRF1Q96T88 793 aaPredicted RBP19.4■□□□□ 0.7
NPHP4-210ENST00000506941 SEPT5Q99719 369 aaPredicted RBP19.4■□□□□ 0.7
NPHP4-210ENST00000506941 FUCA2Q9BTY2 467 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 CD320Q9NPF0 282 aa19.4■□□□□ 0.7
NPHP4-210ENST00000506941 DNMT3BQ9UBC3 853 aaKnown RBP19.4■□□□□ 0.7
NPHP4-210ENST00000506941 CUL9Q8IWT3 2517 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 C19orf67A6NJJ6 358 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 P4HA2O15460 535 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 HAPLN1P10915 354 aaPredicted RBP19.39■□□□□ 0.69
NPHP4-210ENST00000506941 PTPN1P18031 435 aaKnown RBP19.39■□□□□ 0.69
NPHP4-210ENST00000506941 ATF6P18850 670 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 CYP2F1P24903 491 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 MTIF2P46199 727 aaKnown RBP19.39■□□□□ 0.69
NPHP4-210ENST00000506941 NDST1P52848 882 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 ANO6Q4KMQ2 910 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 WDR44Q5JSH3 913 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 FAM114A1Q8IWE2 563 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 B3GALNT2Q8NCR0 500 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 MYCBPAPQ8TBZ2 947 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 PCED1BQ96HM7 432 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 RPGRIP1Q96KN7 1286 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 TWNKQ96RR1 684 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 COL25A1Q9BXS0 654 aaPredicted RBP19.39■□□□□ 0.69
NPHP4-210ENST00000506941 CYP3A43Q9HB55 503 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 ABCB6Q9NP58 842 aa19.39■□□□□ 0.69
NPHP4-210ENST00000506941 NUP210Q8TEM1 1887 aaPredicted RBP19.39■□□□□ 0.69
NPHP4-210ENST00000506941 SYCE3A1L190 88 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 KCNJ18B7U540 433 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 LOC730098B7Z3J9 87 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 CD58P19256 250 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 GPR15P49685 360 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 LRMPQ12912 555 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 KCNJ12Q14500 433 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 MGAT5BQ3V5L5 792 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 CFAP221Q4G0U5 840 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 MIIPQ5JXC2 388 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 CDKAL1Q5VV42 579 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 ACOT1Q86TX2 421 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 SPATA2LQ8IUW3 424 aaPredicted RBP19.38■□□□□ 0.69
NPHP4-210ENST00000506941 WHAMMQ8TF30 809 aa19.38■□□□□ 0.69
NPHP4-210ENST00000506941 C2CD4DB7Z1M9 353 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 NRG2O14511 850 aaPredicted RBP19.37■□□□□ 0.69
NPHP4-210ENST00000506941 CILPO75339 1184 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 RHOP08100 348 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 ALDH1A3P47895 512 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 TUFMP49411 452 aaKnown RBP19.37■□□□□ 0.69
NPHP4-210ENST00000506941 MYL5Q02045 173 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 CYP27A1Q02318 531 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 PLD1Q13393 1074 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 NCAPHQ15003 741 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 NFKBIBQ15653 356 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 MAN2A1Q16706 1144 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 SLC5A9Q2M3M2 681 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 SKOR2Q2VWA4 1001 aaPredicted RBP19.37■□□□□ 0.69
NPHP4-210ENST00000506941 PABPC1LQ4VXU2 614 aaKnown RBP19.37■□□□□ 0.69
NPHP4-210ENST00000506941 TCP11X2Q5H9J9 407 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 UNC93AQ86WB7 457 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 HS6ST3Q8IZP7 471 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 STKLD1Q8NE28 680 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 FUBP3Q96I24 572 aaKnown RBP eCLIP19.37■□□□□ 0.69
NPHP4-210ENST00000506941 FAXDC2Q96IV6 333 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 CORO1BQ9BR76 489 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 B3GNT5Q9BYG0 378 aa19.37■□□□□ 0.69
NPHP4-210ENST00000506941 INTS2Q9H0H0 1204 aaKnown RBP19.37■□□□□ 0.69
NPHP4-210ENST00000506941 FANCLQ9NW38 375 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms