RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TM4SF4P48230 202 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 PLTPP55058 493 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 INHBEP58166 350 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 SGO2Q562F6 1265 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 TTMPQ5BVD1 217 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 KCNT1Q5JUK3 1230 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 PPP1R26Q5T8A7 1209 aaPredicted RBP12.9□□□□□ -0.34
LIN54-206ENST00000506560 XYLT1Q86Y38 959 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 IQCKQ8N0W5 287 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 C3orf20Q8ND61 904 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 FAM204AQ9H8W3 233 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 TSPAN16Q9UKR8 245 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 IPPQ9Y573 584 aa12.9□□□□□ -0.34
LIN54-206ENST00000506560 PAEPP09466 180 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 FGFR1P11362 822 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 LMO2P25791 158 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 HSD17B3P37058 310 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 CACNB2Q08289 660 aaPredicted RBP12.89□□□□□ -0.35
LIN54-206ENST00000506560 INCA1Q0VD86 236 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 SREBF2Q12772 1141 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 PDCLQ13371 301 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 TAF5Q15542 800 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 CYP1B1Q16678 543 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 KCTD16Q68DU8 428 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 MFSD7Q6UXD7 560 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 RHOT1Q8IXI2 618 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.89□□□□□ -0.35
LIN54-206ENST00000506560 FAM71BQ8TC56 605 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 ZDHHC18Q9NUE0 388 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 PCYOX1Q9UHG3 505 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 RALGAPA2Q2PPJ7 1873 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 GABBR2O75899 941 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 PDGFRBP09619 1106 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 CHRNA3P32297 505 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 VPS41P49754 854 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
LIN54-206ENST00000506560 YWHAEP62258 255 aaKnown RBP12.89□□□□□ -0.35
LIN54-206ENST00000506560 NFX1Q12986 1120 aaKnown RBP12.89□□□□□ -0.35
LIN54-206ENST00000506560 KLF1Q13351 362 aaPredicted RBP12.89□□□□□ -0.35
LIN54-206ENST00000506560 CUL1Q13616 776 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 SOWAHAQ2M3V2 549 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 LPPQ93052 612 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 HAUS1Q96CS2 278 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 LHX5Q9H2C1 402 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 RNF186Q9NXI6 227 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 CNTN3Q9P232 1028 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 IP6K2Q9UHH9 426 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 CEP83Q9Y592 693 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 CDY2AQ9Y6F7 541 aa12.89□□□□□ -0.35
LIN54-206ENST00000506560 PDCD11Q14690 1871 aaKnown RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 TP73O15350 636 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 KRT3P12035 628 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 GPS2Q13227 327 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 TTC30AQ86WT1 665 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 OSBPL8Q9BZF1 889 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 PLAAQ9Y263 795 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 Q9Y3F1 56 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 E5RJQ4 531 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 KIF3CO14782 793 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 CHRNA1P02708 482 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 ATF7P17544 494 aaPredicted RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 PSMA2P25787 234 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 CRYBB1P53674 252 aaPredicted RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 FCGRTP55899 365 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 GJA9P57773 515 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 DHX9Q08211 1270 aaKnown RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 NNTQ13423 1086 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 KYAT1Q16773 422 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 GOLGA7BQ2TAP0 167 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 PMF1Q6P1K2 205 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 TMC3Q7Z5M5 1100 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 GLIS1Q8NBF1 620 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 NT5C1AQ9BXI3 368 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 SAE1Q9UBE0 346 aaPredicted RBP12.88□□□□□ -0.35
LIN54-206ENST00000506560 GTF2IRD1Q9UHL9 959 aa12.88□□□□□ -0.35
LIN54-206ENST00000506560 PTGESO14684 152 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 PSTPIP1O43586 416 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 KRT1P04264 644 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 CD48P09326 243 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 IRF5Q13568 498 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 CFAP58Q5T655 872 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 KATNAL2Q8IYT4 538 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 KBTBD7Q8WVZ9 684 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 PWWP2AQ96N64 755 aa12.87□□□□□ -0.35
LIN54-206ENST00000506560 SH3GL2Q99962 352 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms