RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 WDR72Q3MJ13 1102 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 WSCD1Q658N2 575 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 SV2AQ7L0J3 742 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 FRMD5Q7Z6J6 570 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 ADHFE1Q8IWW8 467 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 TCEAL8Q8IYN2 117 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 ELMOD1Q8N336 334 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 PDCL2Q8N4E4 241 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 CXorf38Q8TB03 319 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 SLC7A14Q8TBB6 771 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 PLEKHO2Q8TD55 490 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 C2orf15Q8WU43 125 aaKnown RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 SUSD6Q92537 303 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 SMG7Q92540 1137 aaKnown RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 TAF4BQ92750 862 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 EEF2KMTQ96G04 330 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 ACBD6Q9BR61 282 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 IMPG2Q9BZV3 1241 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 DDX43Q9NXZ2 648 aaKnown RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 ARMCX3Q9UH62 379 aaPredicted RBP7.79□□□□□ -1.16
GYPB-206ENST00000506516 NR2E1Q9Y466 385 aa7.79□□□□□ -1.16
GYPB-206ENST00000506516 A0A0C4DFX4 3053 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 CITO14578 2027 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 TRIM49BA6NDI0 452 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 DLL1O00548 723 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 RFPL2O75678 378 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 TRIM49P0CI25 452 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 TRIM49CP0CI26 452 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 PTPN2P17706 415 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 PTMSP20962 102 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 PCSK1P29120 753 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 ALDH1A3P47895 512 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 PMS1P54277 932 aaKnown RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 STX17P56962 302 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 NLRP12P59046 1061 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 MCCD1P59942 119 aaPredicted RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 MYL6P60660 151 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 VAC14Q08AM6 782 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 PLD1Q13393 1074 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 NFE2Q16621 373 aaPredicted RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 TPD52L1Q16890 204 aaPredicted RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 SOWAHAQ2M3V2 549 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 ZACNQ401N2 412 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 CCDC40Q4G0X9 1142 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 SLC39A12Q504Y0 691 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 ZNF667Q5HYK9 610 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 CT47A1Q5JQC4 288 aaPredicted RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 TCERG1LQ5VWI1 586 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 TDRD10Q5VZ19 366 aaKnown RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 KRT39Q6A163 491 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 IQCEQ6IPM2 695 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 TTI2Q6NXR4 508 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 ZC3H3Q8IXZ2 948 aaKnown RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 ADGRF2Q8IZF7 708 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 GJD3Q8N144 294 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 OR6B3Q8NGW1 331 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 SPPL2BQ8TCT7 592 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 GPT2Q8TD30 523 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 ACSF2Q96CM8 615 aaPredicted RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 FAM84AQ96KN4 292 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 RPGRIP1Q96KN7 1286 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 ZNF512Q96ME7 567 aaPredicted RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 PGLYRP2Q96PD5 576 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 SRRTQ9BXP5 876 aaKnown RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 DNAI2Q9GZS0 605 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 ZCWPW1Q9H0M4 648 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 GZF1Q9H116 711 aaPredicted RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 SNX25Q9H3E2 840 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 MMRN2Q9H8L6 949 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 VRTNQ9H8Y1 702 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 TMEM8AQ9HCN3 771 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 HSFX1Q9UBD0 423 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 NXF1Q9UBU9 619 aaKnown RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 RWDD2AQ9UIY3 292 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 L1RE1Q9UN81 338 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 POLIQ9UNA4 740 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 CTNND2Q9UQB3 1225 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 USTQ9Y2C2 406 aa7.78□□□□□ -1.16
GYPB-206ENST00000506516 FCF1Q9Y324 198 aaKnown RBP7.78□□□□□ -1.16
GYPB-206ENST00000506516 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 GABRDO14764 452 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 CCL16O15467 120 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 TACC1O75410 805 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 PAPLNO95428 1278 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 SEC24AO95486 1093 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 HLA-DRAP01903 254 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 POU2F2P09086 479 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 WEE2P0C1S8 567 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 OR4Q2P0C623 313 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 CCDC192P0DO97 292 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 TRIM21P19474 475 aaKnown RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 WARSP23381 471 aaKnown RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 PIK3CAP42336 1068 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 GCLMP48507 274 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 EPHB3P54753 998 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 ZP2Q05996 745 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 CETN1Q12798 172 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 DUSP4Q13115 394 aa7.77□□□□□ -1.17
GYPB-206ENST00000506516 MAPRE1Q15691 268 aaKnown RBP7.77□□□□□ -1.17
GYPB-206ENST00000506516 ZNF699Q32M78 642 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms