RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TBC1D15Q8TC07 691 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 FAM71BQ8TC56 605 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 SMCR8Q8TEV9 937 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZNF384Q8TF68 577 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 DACT3Q96B18 629 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZSCAN31Q96LW9 406 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZNF512Q96ME7 567 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 TOX2Q96NM4 488 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 PPP1R9BQ96SB3 815 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 CNPPD1Q9BV87 410 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 SPATA5L1Q9BVQ7 753 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 SORBS1Q9BX66 1292 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 IMPG2Q9BZV3 1241 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 NELFAQ9H3P2 528 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 TMEM8AQ9HCN3 771 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 HEYLQ9NQ87 328 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 TERF2IPQ9NYB0 399 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 RRN3Q9NYV6 651 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 RGL1Q9NZL6 768 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 MID2Q9UJV3 735 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 SMG5Q9UPR3 1016 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 JAG2Q9Y219 1238 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 RAPGEF2Q9Y4G8 1499 aa3.78□□□□□ -1.8
TRAPPC11-205ENST00000506426 ZCCHC11Q5TAX3 1644 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 UGGT2Q9NYU1 1516 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 KDM5BQ9UGL1 1544 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 LOC102723971A0A1B0GUV8 181 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 PRRT4C9JH25 899 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 RAB27BO00194 218 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 MATN2O00339 956 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 CDC14BO60729 498 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 KIF20AO95235 890 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 AGR2O95994 175 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 VEGFAP15692 232 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 GNAT2P19087 354 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 CR2P20023 1033 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 FDXRP22570 491 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 MGAT1P26572 445 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 ACVR2AP27037 513 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 GABRB3P28472 473 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 DDIT3P35638 169 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 VIPR2P41587 438 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 AFF3P51826 1226 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 POLE2P56282 527 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 SATB1Q01826 763 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 LMOD3Q0VAK6 560 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 TCF15Q12870 199 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 TBX2Q13207 712 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 ARHGEF7Q14155 803 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 TAF12Q16514 161 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 INSCQ1MX18 579 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLC4A8Q2Y0W8 1093 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 WDR78Q5VTH9 848 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 BORAQ6PGQ7 559 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 ZDHHC24Q6UX98 284 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 GPRIN1Q7Z2K8 1008 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 PLEKHH3Q7Z736 793 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 KRT73Q86Y46 540 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 TMEM151BQ8IW70 566 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 GPR135Q8IZ08 494 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 LINC01356Q8N9X3 169 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 TMIEQ8NEW7 156 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 DNERQ8NFT8 737 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 IPO4Q8TEX9 1081 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 RAPGEF4Q8WZA2 1011 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 MPP4Q96JB8 637 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 KLHL32Q96NJ5 620 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 SENP7Q9BQF6 1050 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 CPPED1Q9BRF8 314 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 FAM167BQ9BTA0 163 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 LSM14BQ9BX40 385 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 CPEB1Q9BZB8 566 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 DHX36Q9H2U1 1008 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 AGO3Q9H9G7 860 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 AS3MTQ9HBK9 375 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 SPON1Q9HCB6 807 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 XPNPEP3Q9NQH7 507 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 ITM2CQ9NQX7 267 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 POGKQ9P215 609 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 OAZ3Q9UMX2 235 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 UHRF1BP1LA0JNW5 1464 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 WDR7Q9Y4E6 1490 aa3.77□□□□□ -1.81
TRAPPC11-205ENST00000506426 GLI2P10070 1586 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 AQP12BA6NM10 295 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 E9PLN8 166 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 TRIM38O00635 465 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PIP5K1BO14986 540 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 CCP110O43303 1012 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 KCNQ3O43525 872 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 MFAP3LO75121 409 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 CNOT4O95628 575 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 TSPAN15O95858 294 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 PYGLP06737 847 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 ITGA5P08648 1049 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 CKBP12277 381 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 TPH1P17752 444 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 SLC6A2P23975 617 aa3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 RPS19P39019 145 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-205ENST00000506426 CPT1AP50416 773 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms