RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 R3HCC1Q9Y3T6 440 aaKnown RBP26.55■■□□□ 1.84
HERC4-212ENST00000505760 TMEM191BP0C7N4 346 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 TDGF1P13385 188 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 RBP5P82980 135 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 MYL7Q01449 175 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 CMTM8Q8IZV2 173 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 GPD1LQ8N335 351 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 FAM84AQ96KN4 292 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 ACBD6Q9BR61 282 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 MTMR12Q9C0I1 747 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 LRRC27Q9C0I9 530 aa26.54■■□□□ 1.84
HERC4-212ENST00000505760 MAGED2Q9UNF1 606 aaPredicted RBP26.54■■□□□ 1.84
HERC4-212ENST00000505760 KIAA0391O15091 583 aaKnown RBP26.53■■□□□ 1.84
HERC4-212ENST00000505760 AVPR1AP37288 418 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 NLRP12P59046 1061 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 SATB1Q01826 763 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 TNK2Q07912 1038 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 DGKKQ5KSL6 1271 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 TXNDC11Q6PKC3 985 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 SPEM1Q8N4L4 309 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 MAB21L3Q8N8X9 362 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 LINC00301Q8NCQ3 95 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 TNMDQ9H2S6 317 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 RBM12Q9NTZ6 932 aaKnown RBP26.53■■□□□ 1.84
HERC4-212ENST00000505760 SNX9Q9Y5X1 595 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 OBSL1O75147 1896 aa26.53■■□□□ 1.84
HERC4-212ENST00000505760 SPTLC2O15270 562 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 CSH1P0DML2 217 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 CSH2P0DML3 217 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 HMGA1P17096 107 aaKnown RBP26.52■■□□□ 1.84
HERC4-212ENST00000505760 ACAT1P24752 427 aaKnown RBP26.52■■□□□ 1.84
HERC4-212ENST00000505760 DDX6P26196 483 aaKnown RBP eCLIP26.52■■□□□ 1.84
HERC4-212ENST00000505760 GAS6Q14393 721 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 GPR161Q8N6U8 529 aaKnown RBP26.52■■□□□ 1.84
HERC4-212ENST00000505760 LEO1Q8WVC0 666 aaPredicted RBP26.52■■□□□ 1.84
HERC4-212ENST00000505760 ANKRD36BP1Q96IX9 119 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 ZNF396Q96N95 335 aaPredicted RBP26.52■■□□□ 1.84
HERC4-212ENST00000505760 BACH2Q9BYV9 841 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 ABCB6Q9NP58 842 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 GDAP2Q9NXN4 497 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 RAB23Q9ULC3 237 aa26.52■■□□□ 1.84
HERC4-212ENST00000505760 F11P03951 625 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 GPR15P49685 360 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 RPL10AP62906 217 aaKnown RBP26.51■■□□□ 1.83
HERC4-212ENST00000505760 MYO1EQ12965 1108 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 PUM1Q14671 1186 aaKnown RBP eCLIP26.51■■□□□ 1.83
HERC4-212ENST00000505760 PON2Q15165 354 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 ITPRIPL2Q3MIP1 535 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 INTS6LQ5JSJ4 861 aaKnown RBP26.51■■□□□ 1.83
HERC4-212ENST00000505760 SCARA3Q6AZY7 606 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 TMEM150AQ86TG1 271 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 ADGRF2Q8IZF7 708 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 TOP6BLQ8N6T0 577 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 CXorf38Q8TB03 319 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 CUEDC2Q9H467 287 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 TFIP11Q9UBB9 837 aaKnown RBP26.51■■□□□ 1.83
HERC4-212ENST00000505760 SIX4Q9UIU6 781 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 GTF3C4Q9UKN8 822 aa26.51■■□□□ 1.83
HERC4-212ENST00000505760 ZNF233A6NK53 670 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 CYP2F1P24903 491 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 PCSK1P29120 753 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 LHX1P48742 406 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 AMPD3Q01432 767 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 DDR2Q16832 855 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 SDHAF4Q5VUM1 108 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 LMBRD2Q68DH5 695 aaPredicted RBP26.5■■□□□ 1.83
HERC4-212ENST00000505760 DGLUCYQ7Z3D6 616 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 STKLD1Q8NE28 680 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 GLIS3Q8NEA6 775 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 SPATA18Q8TC71 538 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 MRPS31Q92665 395 aaKnown RBP26.5■■□□□ 1.83
HERC4-212ENST00000505760 HPS3Q969F9 1004 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 GKN1Q9NS71 199 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 KBTBD4Q9NVX7 518 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 UXTQ9UBK9 157 aaPredicted RBP26.5■■□□□ 1.83
HERC4-212ENST00000505760 GMEB2Q9UKD1 530 aa26.5■■□□□ 1.83
HERC4-212ENST00000505760 PPP6R2O75170 966 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 TNNC2P02585 160 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 SURF1Q15526 300 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 E2F4Q16254 413 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 TXNDC8Q6A555 127 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 Q6ZS52 159 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 OSTM1Q86WC4 334 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 SPATA2LQ8IUW3 424 aaPredicted RBP26.49■■□□□ 1.83
HERC4-212ENST00000505760 DHX58Q96C10 678 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 TRIM9Q9C026 710 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 TDP1Q9NUW8 608 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 INTS13Q9NVM9 706 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 CCL26Q9Y258 94 aa26.49■■□□□ 1.83
HERC4-212ENST00000505760 ASIC1P78348 528 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 WDR44Q5JSH3 913 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 CBWD2Q8IUF1 395 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 IQUBQ8NA54 791 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 USP13Q92995 863 aaPredicted RBP26.48■■□□□ 1.83
HERC4-212ENST00000505760 HPDLQ96IR7 371 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 PKMYT1Q99640 499 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 KIF9Q9HAQ2 790 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 HSPBP1Q9NZL4 362 aa26.48■■□□□ 1.83
HERC4-212ENST00000505760 SOBPA7XYQ1 873 aa26.47■■□□□ 1.83
HERC4-212ENST00000505760 CCINQ13939 588 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms