RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 ABCB6Q9NP58 842 aa12.96□□□□□ -0.33
PDLIM7-214ENST00000505746 TMLHEQ9NVH6 421 aa12.96□□□□□ -0.33
PDLIM7-214ENST00000505746 GTSE1Q9NYZ3 720 aa12.96□□□□□ -0.33
PDLIM7-214ENST00000505746 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
PDLIM7-214ENST00000505746 UXTQ9UBK9 157 aaPredicted RBP12.96□□□□□ -0.33
PDLIM7-214ENST00000505746 SNX9Q9Y5X1 595 aa12.96□□□□□ -0.33
PDLIM7-214ENST00000505746 CFAP54Q96N23 3096 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 EIF3DO15371 548 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 PRAMEF12O95522 483 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 TNNC2P02585 160 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 F11P03951 625 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 HMGA1P17096 107 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 PCSK1P29120 753 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 CTHP32929 405 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 SOX9P48436 509 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 NLRP12P59046 1061 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 E2F4Q16254 413 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 DUOXA2Q1HG44 320 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 ITPRIPL2Q3MIP1 535 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 SPATA2LQ8IUW3 424 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 ADGRF2Q8IZF7 708 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 DCLK2Q8N568 766 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 SNX21Q969T3 373 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 DHX58Q96C10 678 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 ZFYVE19Q96K21 471 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 TRIM9Q9C026 710 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 MTMR12Q9C0I1 747 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 KIF9Q9HAQ2 790 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 INTS13Q9NVM9 706 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 MAGED2Q9UNF1 606 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 SMG5Q9UPR3 1016 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 DMDP11532 3685 aa12.95□□□□□ -0.34
PDLIM7-214ENST00000505746 GABRDO14764 452 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 ACAT1P24752 427 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 CYP2F1P24903 491 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 GPR15P49685 360 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 SNRPFP62306 86 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 ASIC1P78348 528 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 DDR2Q16832 855 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 CFAP221Q4G0U5 840 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 CNNM4Q6P4Q7 775 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 TMEM150AQ86TG1 271 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 MON1AQ86VX9 555 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 SYNPOQ8N3V7 929 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 MAB21L3Q8N8X9 362 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 TTC8Q8TAM2 541 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 ZNF507Q8TCN5 953 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 FUBP3Q96I24 572 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 HPDLQ96IR7 371 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 C7orf25Q9BPX7 421 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 SMG9Q9H0W8 520 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 MAGEF1Q9HAY2 307 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 GKN1Q9NS71 199 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 TDP1Q9NUW8 608 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 HSPBP1Q9NZL4 362 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 SIX4Q9UIU6 781 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 GTF3C4Q9UKN8 822 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 RAB23Q9ULC3 237 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 VPS13AQ96RL7 3174 aa12.94□□□□□ -0.34
PDLIM7-214ENST00000505746 PTPRZ1P23471 2315 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 NOL4O94818 638 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 TDGF1P13385 188 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 AMPD2Q01433 879 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 SATB1Q01826 763 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 TNK2Q07912 1038 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 PUM1Q14671 1186 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 PON2Q15165 354 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 SOWAHAQ2M3V2 549 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 FAM26FQ5R3K3 315 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 LMBRD2Q68DH5 695 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 TXNDC8Q6A555 127 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 CC2D1AQ6P1N0 951 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 TXNDC11Q6PKC3 985 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 SHC4Q6S5L8 630 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 C4orf50Q6ZRC1 276 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 EPM2AIP1Q7L775 607 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 OSTM1Q86WC4 334 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 CBWD2Q8IUF1 395 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 WDR49Q8IV35 697 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 GLIS3Q8NEA6 775 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 USP13Q92995 863 aaPredicted RBP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 RMDN1Q96DB5 314 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 TRMT2BQ96GJ1 504 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 PKMYT1Q99640 499 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 RBM12Q9NTZ6 932 aaKnown RBP12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 FAM13BQ9NYF5 915 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 GMEB2Q9UKD1 530 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 CDH9Q9ULB4 789 aa12.93□□□□□ -0.34
PDLIM7-214ENST00000505746 UBE4BO95155 1302 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 POLR2DO15514 142 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 SDHBP21912 280 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 CNR2P34972 360 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 HOXD13P35453 343 aa12.92□□□□□ -0.34
PDLIM7-214ENST00000505746 RUNX3Q13761 415 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms