RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 DCAKDQ8WVC6 231 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 PAFAH2Q99487 392 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 PIDD1Q9HB75 910 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 METTL5Q9NRN9 209 aaKnown RBP12.51□□□□□ -0.41
UBE3D-206ENST00000505226 ARHGAP28Q9P2N2 729 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 IP6K2Q9UHH9 426 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 KRT36O76013 467 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 DYNLT1P63172 113 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 RASA2Q15283 850 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 HIF1AQ16665 826 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 RINLQ6ZS11 566 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 USP37Q86T82 979 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 TTC7BQ86TV6 843 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 IGDCC3Q8IVU1 814 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 PHC3Q8NDX5 983 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SLC35B2Q8TB61 432 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 WDR60Q8WVS4 1066 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 DNAJC9Q8WXX5 260 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 NKD2Q969F2 451 aaPredicted RBP12.5□□□□□ -0.41
UBE3D-206ENST00000505226 ZNF333Q96JL9 665 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 PDCD2LQ9BRP1 358 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 ANKFY1Q9P2R3 1169 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SHOC2Q9UQ13 582 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 CNTN6Q9UQ52 1028 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 LRRD1A4D1F6 860 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 CLGNO14967 610 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 GSC2O15499 205 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 ZWINTO95229 277 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 ITGAVP06756 1048 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 JAK3P52333 1124 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 GHRHRQ02643 423 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 KPNB1Q14974 876 aaKnown RBP12.5□□□□□ -0.41
UBE3D-206ENST00000505226 WDTC1Q8N5D0 677 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 RBM41Q96IZ5 413 aaKnown RBP12.5□□□□□ -0.41
UBE3D-206ENST00000505226 FNBP1Q96RU3 617 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SAR1AQ9NR31 198 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SNCAIPQ9Y6H5 919 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SCINQ9Y6U3 715 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 DOCK5Q9H7D0 1870 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SERPINB3P29508 390 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 RASSF2P50749 326 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SP4Q02446 784 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 TFDP3Q5H9I0 405 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 SPDYAQ5MJ70 313 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 NAT8LQ8N9F0 302 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 DCLRE1BQ9H816 532 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 PCDH9Q9HC56 1237 aa12.5□□□□□ -0.41
UBE3D-206ENST00000505226 ZBED4O75132 1171 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 TMEM63AO94886 807 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 CST3P01034 146 aaPredicted RBP12.49□□□□□ -0.41
UBE3D-206ENST00000505226 ACADSP16219 412 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 CHRNA5P30532 468 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 SMTNL2Q2TAL5 461 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 C11orf91Q3C1V1 193 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 CMPK2Q5EBM0 449 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 CEP128Q6ZU80 1094 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 RHPN2Q8IUC4 686 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 FBXO36Q8NEA4 188 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 PYROXD1Q8WU10 500 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 ZBTB10Q96DT7 871 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 SERAC1Q96JX3 654 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 BTBD10Q9BSF8 475 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 MANSC1Q9H8J5 431 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 PCDHA10Q9Y5I2 948 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 E5RJQ4 531 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 SFNP31947 248 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 LIG4P49917 911 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 KRT76Q01546 638 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 RCN1Q15293 331 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 KCNT1Q5JUK3 1230 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 KIAA0319LQ8IZA0 1049 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
UBE3D-206ENST00000505226 SSU72Q9NP77 194 aaKnown RBP12.49□□□□□ -0.41
UBE3D-206ENST00000505226 TJP2Q9UDY2 1190 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 AGO2Q9UKV8 859 aaKnown RBP12.49□□□□□ -0.41
UBE3D-206ENST00000505226 TBX10O75333 385 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 RGS20O76081 388 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 CD48P09326 243 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 IL1R2P27930 398 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 RPL22P35268 128 aaKnown RBP12.49□□□□□ -0.41
UBE3D-206ENST00000505226 ZNF132P52740 706 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 ZNF394Q53GI3 561 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 TMEM154Q6P9G4 183 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 MCF2L2Q86YR7 1114 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 FBXO27Q8NI29 283 aa12.49□□□□□ -0.41
UBE3D-206ENST00000505226 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms