RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 CAGE1Q8TC20 777 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 DUSP26Q9BV47 211 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 KLK15Q9H2R5 256 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 ZBTB21Q9ULJ3 1066 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 MTO1Q9Y2Z2 717 aaKnown RBP6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 RNF123Q5XPI4 1314 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 NPHP3Q7Z494 1330 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 SLIT3O75094 1523 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 RBMXL2O75526 392 aaKnown RBP6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 ELFN1P0C7U0 828 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 EDNRBP24530 442 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 CACNA2D1P54289 1103 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 ELLP55199 621 aaPredicted RBP6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 NHLH1Q02575 133 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 RHOT1Q8IXI2 618 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 IFI44Q8TCB0 444 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 JADE3Q92613 823 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 LRIG1Q96JA1 1093 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 PNKPQ96T60 521 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 C11orf54Q9H0W9 315 aaPredicted RBP6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 IL17RBQ9NRM6 502 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 CTTNBP2NLQ9P2B4 639 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 MAPK8IP3Q9UPT6 1336 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 ALS2Q96Q42 1657 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 ARHGEF10O15013 1369 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 RGPD1P0DJD0 1748 aa6.16□□□□□ -1.42
DEPDC1B-203ENST00000505017 NFAT5O94916 1531 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 ABCC6O95255 1503 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 INO80B-WBP1J3KQ70 363 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PCDHGA12O60330 932 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 ERN1O75460 977 aaKnown RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 ALAS1P13196 640 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 C5AR1P21730 350 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 GATA3P23771 443 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 IARSP41252 1262 aaKnown RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PROK1P58294 105 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 MRPS35P82673 323 aaKnown RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 CALD1Q05682 793 aaKnown RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 FOXF2Q12947 444 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 SF3B3Q15393 1217 aaKnown RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 SP5Q6BEB4 398 aaPredicted RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 FOXR2Q6PJQ5 311 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 ARHGEF25Q86VW2 580 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 CCDC146Q8IYE0 955 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 TCP11L2Q8N4U5 519 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 CNTD1Q8N815 330 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 ACTRT2Q8TDY3 377 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PLEKHF1Q96S99 279 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 DMRTA2Q96SC8 542 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 C7orf25Q9BPX7 421 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 INO80BQ9C086 356 aaPredicted RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 MANSC1Q9H8J5 431 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 KIAA1586Q9HCI6 787 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 SLC45A2Q9UMX9 530 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 IPPQ9Y573 584 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PCDHGA7Q9Y5G6 932 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PCDHGA6Q9Y5G7 932 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PCDHGA3Q9Y5H0 932 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PCDHA13Q9Y5I0 950 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 PEAK1Q9H792 1746 aa6.15□□□□□ -1.42
DEPDC1B-203ENST00000505017 USP19O94966 1318 aa6.15□□□□□ -1.43
DEPDC1B-203ENST00000505017 IL16Q14005 1332 aa6.15□□□□□ -1.43
DEPDC1B-203ENST00000505017 MAP3K19Q56UN5 1328 aa6.15□□□□□ -1.43
DEPDC1B-203ENST00000505017 MED1Q15648 1581 aaPredicted RBP6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 LTN1O94822 1766 aa6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 PPM1GO15355 546 aaPredicted RBP6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 CT47B1P0C2W7 299 aaPredicted RBP6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 CNGA1P29973 690 aa6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 TMPOP42166 694 aaKnown RBP6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 AMPHP49418 695 aa6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 RRS1Q15050 365 aaKnown RBP6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 KRT28Q7Z3Y7 464 aa6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 LIMCH1Q9UPQ0 1083 aa6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 KDRP35968 1356 aa6.14□□□□□ -1.43
DEPDC1B-203ENST00000505017 A0A1W2PS29 197 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 FZD9O00144 591 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 GRM6O15303 877 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 NDUFS2O75306 463 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 AGFG2O95081 481 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 ZNF280AP59817 542 aaPredicted RBP6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 EIF4A2Q14240 407 aaKnown RBP6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 EGFLAMQ63HQ2 1017 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 VWA1Q6PCB0 445 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 TSHZ1Q6ZSZ6 1077 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 TMPRSS9Q7Z410 1059 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 DDX42Q86XP3 938 aaKnown RBP eCLIP6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 ZNF384Q8TF68 577 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 IP6K1Q92551 441 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 KLHL32Q96NJ5 620 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 MED15Q96RN5 788 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 SPATA5L1Q9BVQ7 753 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 MYH16Q9H6N6 1097 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 LRIT1Q9P2V4 623 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 ZNF335Q9H4Z2 1342 aaPredicted RBP6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 PLEKHG2Q9H7P9 1386 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 TNS3Q68CZ2 1445 aa6.13□□□□□ -1.43
DEPDC1B-203ENST00000505017 PXDNQ92626 1479 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms