RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
MED28-203ENST00000503945 SLFN14P0C7P3 912 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 CDC25CP30307 473 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 HOXD13P35453 343 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 TSSK4Q6SA08 328 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 TMC8Q8IU68 726 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 TTC9BQ8N6N2 239 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 TOP6BLQ8N6T0 577 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 XXYLT1Q8NBI6 393 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 SPATA18Q8TC71 538 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 FAM3CQ92520 227 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 NELL1Q92832 810 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 GCNAQ96QF7 691 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 LPIN3Q9BQK8 851 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 PI4K2AQ9BTU6 479 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 MTMR12Q9C0I1 747 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 TASP1Q9H6P5 420 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 SLC39A2Q9NP94 309 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 THG1LQ9NWX6 298 aaKnown RBP12.84□□□□□ -0.35
MED28-203ENST00000503945 CGNQ9P2M7 1197 aaKnown RBP12.84□□□□□ -0.35
MED28-203ENST00000503945 ZMYM5Q9UJ78 669 aa12.84□□□□□ -0.35
MED28-203ENST00000503945 CLIC2O15247 247 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 CHADO15335 359 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 TGFB1I1O43294 461 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 LILRB5O75023 590 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 DLATP10515 647 aaKnown RBP12.83□□□□□ -0.36
MED28-203ENST00000503945 CMA1P23946 247 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 PCSK1P29120 753 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 RPS9P46781 194 aaKnown RBP12.83□□□□□ -0.36
MED28-203ENST00000503945 MLLT6P55198 1093 aaPredicted RBP12.83□□□□□ -0.36
MED28-203ENST00000503945 RPL10AP62906 217 aaKnown RBP12.83□□□□□ -0.36
MED28-203ENST00000503945 PSMD2Q13200 908 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 PKP1Q13835 747 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 SNRNP35Q16560 246 aaKnown RBP12.83□□□□□ -0.36
MED28-203ENST00000503945 KNOP1Q1ED39 458 aaKnown RBP12.83□□□□□ -0.36
MED28-203ENST00000503945 WDR49Q8IV35 697 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 NELFCDQ8IXH7 590 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 ZBTB44Q8NCP5 570 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 SCFD1Q8WVM8 642 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 CCDC127Q96BQ5 260 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 MMS19Q96T76 1030 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 AGPAT3Q9NRZ7 376 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 ZSCAN32Q9NX65 697 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 NCDNQ9UBB6 729 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 SIX4Q9UIU6 781 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 GTF3C4Q9UKN8 822 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 PCDHGA2Q9Y5H1 932 aa12.83□□□□□ -0.36
MED28-203ENST00000503945 SOBPA7XYQ1 873 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 GABRDO14764 452 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 FAM163BP0C2L3 166 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 CSH1P0DML2 217 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 CSH2P0DML3 217 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 ATF6P18850 670 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 ACAT1P24752 427 aaKnown RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 CYP2F1P24903 491 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 CASP1P29466 404 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 WEE1P30291 646 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 CYP2J2P51589 502 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 KPNA1P52294 538 aaPredicted RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 TRPC3Q13507 836 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 CUL4BQ13620 913 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 SOWAHAQ2M3V2 549 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 INTS6LQ5JSJ4 861 aaKnown RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 STXBP5Q5T5C0 1151 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 LMBRD2Q68DH5 695 aaPredicted RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 SCARA3Q6AZY7 606 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 C1orf228Q6PIY5 440 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 TRAPPC11Q7Z392 1133 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 SPATA2LQ8IUW3 424 aaPredicted RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 OR5B17Q8NGF7 314 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 GOLGA5Q8TBA6 731 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 PAGE5Q96GU1 130 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 SLC46A2Q9BY10 475 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 LMAN1LQ9HAT1 526 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 ABCB6Q9NP58 842 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 TMLHEQ9NVH6 421 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 OBP2AQ9NY56 170 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 USP25Q9UHP3 1055 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 SERTAD1Q9UHV2 236 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 MAGED2Q9UNF1 606 aaPredicted RBP12.82□□□□□ -0.36
MED28-203ENST00000503945 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 PIAS3Q9Y6X2 628 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 F5P12259 2224 aa12.82□□□□□ -0.36
MED28-203ENST00000503945 EXOC3O60645 756 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 CST3P01034 146 aaPredicted RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 PDGFRBP09619 1106 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 CCNE1P24864 410 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 AVPR1AP37288 418 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 KRT85P78386 507 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 EHHADHQ08426 723 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms