RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 CARMIL1Q5VZK9 1371 aa7.16□□□□□ -1.26
NIPBL-203ENST00000503274 KIAA0586Q9BVV6 1533 aa7.16□□□□□ -1.26
NIPBL-203ENST00000503274 F5H697 171 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 MYO1CO00159 1063 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 BTN3A1O00481 513 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 TBX3O15119 743 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 HKR1P10072 659 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 EN2P19622 333 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 ITGALP20701 1170 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 AVPR1BP47901 424 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 GCLCP48506 637 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 NDUFV1P49821 464 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 BOP1Q14137 746 aaKnown RBP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 HLTFQ14527 1009 aaKnown RBP eCLIP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 POLD3Q15054 466 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 LONRF3Q496Y0 759 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 LMBRD2Q68DH5 695 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 LAIR1Q6GTX8 287 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 Q6YL49 198 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 FAM9AQ8IZU1 332 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 LNX2Q8N448 690 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 FBXO41Q8TF61 875 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 Q96MF0 132 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 SLC46A1Q96NT5 459 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 PCED1AQ9H1Q7 454 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 DDX21Q9NR30 783 aaKnown RBP eCLIP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 ING1Q9UK53 422 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-203ENST00000503274 TMX2Q9Y320 296 aa7.15□□□□□ -1.26
NIPBL-203ENST00000503274 COL4A3Q01955 1670 aa7.15□□□□□ -1.27
NIPBL-203ENST00000503274 CUL7Q14999 1698 aa7.15□□□□□ -1.27
NIPBL-203ENST00000503274 GRID2IPA4D2P6 1211 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 ISM1B1AKI9 464 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 TRIAP1O43715 76 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 TBC1D4O60343 1298 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 MGEA5O60502 916 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 SRGNP10124 158 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 MYF5P13349 255 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 KRT4P19013 534 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 TGM1P22735 817 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 PEX2P28328 305 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 SLC11A2P49281 568 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 SUMO3P55854 103 aaPredicted RBP7.14□□□□□ -1.27
NIPBL-203ENST00000503274 UCP3P55916 312 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 SF3B3Q15393 1217 aaKnown RBP7.14□□□□□ -1.27
NIPBL-203ENST00000503274 KRTAP5-3Q6L8H2 238 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 SUPT20HQ8NEM7 779 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 SSH3Q8TE77 659 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 APIPQ96GX9 242 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 COQ10AQ96MF6 247 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 MOGAT1Q96PD6 335 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 TTYH3Q9C0H2 523 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 LRRC27Q9C0I9 530 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 SYBUQ9NX95 663 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 XPR1Q9UBH6 696 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 DMTF1Q9Y222 760 aa7.14□□□□□ -1.27
NIPBL-203ENST00000503274 A0A0B4J269 797 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 AKAP8O43823 692 aaKnown RBP7.13□□□□□ -1.27
NIPBL-203ENST00000503274 BRAFP15056 766 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 GNALP38405 381 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 VIPR2P41587 438 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 SLC13A2Q13183 592 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 CTBP1Q13363 440 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 TUBB3Q13509 450 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 SEMA5AQ13591 1074 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 IQCB1Q15051 598 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 CNGA2Q16280 664 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 CCDC181Q5TID7 509 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 SLC15A4Q8N697 577 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 DNAJC5GQ8N7S2 189 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 SLC30A5Q8TAD4 765 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 LINC00476Q8WZB0 136 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 CAVIN3Q969G5 261 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 AIFM2Q9BRQ8 373 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 TTPALQ9BTX7 342 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 SMURF2Q9HAU4 748 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 KIAA1586Q9HCI6 787 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 KCTD5Q9NXV2 234 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 CPNE7Q9UBL6 633 aa7.13□□□□□ -1.27
NIPBL-203ENST00000503274 RUSC2Q8N2Y8 1516 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 PTPRGP23470 1445 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 MAST3O60307 1309 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 A0A087WWL8 130 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 DCLK1O15075 740 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 FOXN1O15353 648 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 ATXN1LP0C7T5 689 aaKnown RBP7.12□□□□□ -1.27
NIPBL-203ENST00000503274 DPTQ07507 201 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 SLC44A4Q53GD3 710 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 LAYNQ6UX15 382 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 LDLRAD3Q86YD5 345 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 BEND2Q8NDZ0 799 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 OSBPL9Q96SU4 736 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 SARGQ9BW04 601 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 PCDHGB6Q9Y5F9 930 aa7.12□□□□□ -1.27
NIPBL-203ENST00000503274 EPN1Q9Y6I3 576 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-203ENST00000503274 TTBK1Q5TCY1 1321 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-203ENST00000503274 MAP4K4O95819 1239 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-203ENST00000503274 SLPIP03973 132 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 CYP2C9P11712 490 aa7.11□□□□□ -1.27
NIPBL-203ENST00000503274 XRCC6P12956 609 aaKnown RBP eCLIP7.11□□□□□ -1.27
NIPBL-203ENST00000503274 ZNF134P52741 427 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms