RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 TARBP2Q15633 366 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 TRIP6Q15654 476 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 CAMK4Q16566 473 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 ME3Q16798 604 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TAF1BQ53T94 588 aaPredicted RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 EARS2Q5JPH6 523 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 UBXN11Q5T124 520 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 LRCH2Q5VUJ6 765 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 PPP4R3AQ6IN85 833 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 ANO7Q6IWH7 933 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 ARMCX5Q6P1M9 558 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 KRT25Q7Z3Z0 450 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TMC6Q7Z403 805 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 MRPL10Q7Z7H8 261 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 ZNF410Q86VK4 478 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 RALGPS2Q86X27 583 aaPredicted RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 VSTM4Q8IW00 320 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TMEFF1Q8IYR6 380 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 RNF168Q8IYW5 571 aaPredicted RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 PGBD3Q8N328 593 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 AOPEPQ8N6M6 819 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TRIML1Q8N9V2 468 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 RNF149Q8NC42 400 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 C1orf131Q8NDD1 294 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 CNNM3Q8NE01 707 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 NSUN7Q8NE18 718 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 TSTD1Q8NFU3 115 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 RPLP0P6Q8NHW5 317 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SETD7Q8WTS6 366 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 SPIRE2Q8WWL2 714 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 RLN3Q8WXF3 142 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 PIK3R5Q8WYR1 880 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TNFRSF25Q93038 417 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TMEM209Q96SK2 561 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 PARD6BQ9BYG5 372 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 UNC45AQ9H3U1 944 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 MINDY3Q9H8M7 445 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 ACTR5Q9H9F9 607 aaPredicted RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 KCNMB3Q9NPA1 279 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 ASAH2Q9NR71 780 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 ST7Q9NRC1 585 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 GJB4Q9NTQ9 266 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TRMT1Q9NXH9 659 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 CACNA2D2Q9NY47 1150 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 VPS18Q9P253 973 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 VAV3Q9UKW4 847 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SUFUQ9UMX1 484 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 KCNJ14Q9UNX9 436 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 PPP2R2CQ9Y2T4 447 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 COL4A3BPQ9Y5P4 624 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 DENND4AQ7Z401 1863 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 FLNBO75369 2602 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 C2orf16Q68DN1 1984 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 GCN1Q92616 2671 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 NCANO14594 1321 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 IGKV6-21A0A0C4DH24 114 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FAM237AA0A1B0GTK4 181 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CCDC194A0A1B0GVG4 234 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 MYBPHLA2RUH7 354 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CTAGE15A4D2H0 777 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FAM149AA5PLN7 773 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 VWA3AA6NCI4 1184 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 GOLGA8KD6RF30 607 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 EML1O00423 815 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 TRIM66O15016 1216 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CHADO15335 359 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CUTAO60888 179 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 DTNBO60941 627 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 AKAP3O75969 853 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 B3GAT3O94766 335 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 PAPSS2O95340 614 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 APBB3O95704 486 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 EGFP01133 1207 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 FTH1P19P0C7X4 201 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CTAGE8P0CG41 777 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 GCFC2P16383 781 aaKnown RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 BCKDHBP21953 392 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 ITPKBP27987 946 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 HOXA11P31270 313 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 SLC8A3P57103 927 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CFHR1Q03591 330 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 GFPT1Q06210 699 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 DSC1Q08554 894 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 GRIK3Q13003 919 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 PPP2R5CQ13362 524 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 CCINQ13939 588 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 RAB33AQ14088 237 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 DMC1Q14565 340 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 PTPAQ15257 358 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 MAPK6Q16659 721 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 INF2Q27J81 1249 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 ZNF423Q2M1K9 1284 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 C11orf91Q3C1V1 193 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 STXBP5Q5T5C0 1151 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 NOTUMQ6P988 496 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 PDXDC1Q6P996 788 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 C1orf228Q6PIY5 440 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 LRRC69Q6ZNQ3 347 aa5.56□□□□□ -1.52
HTT-202ENST00000502820 C11orf57Q6ZUT1 292 aaPredicted RBP5.56□□□□□ -1.52
HTT-202ENST00000502820 MIER3Q7Z3K6 550 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms