RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 ZNF461Q8TAF7 563 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 SLC7A14Q8TBB6 771 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 HDAC7Q8WUI4 952 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 BORCS6Q96GS4 357 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 UHRF1Q96T88 793 aaPredicted RBP17.27■□□□□ 0.36
LMNA-217ENST00000498722 DNAJC7Q99615 494 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 OXCT2Q9BYC2 517 aaPredicted RBP17.27■□□□□ 0.36
LMNA-217ENST00000498722 ZNHIT6Q9NWK9 470 aaKnown RBP17.27■□□□□ 0.36
LMNA-217ENST00000498722 POLIQ9UNA4 740 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 SPTBN5Q9NRC6 3674 aaKnown RBP17.27■□□□□ 0.35
LMNA-217ENST00000498722 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 TBC1D4O60343 1298 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 C1RP00736 705 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 CST3P01034 146 aaPredicted RBP17.26■□□□□ 0.35
LMNA-217ENST00000498722 CYP11A1P05108 521 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 SP100P23497 879 aaPredicted RBP17.26■□□□□ 0.35
LMNA-217ENST00000498722 SSTR3P32745 418 aaPredicted RBP17.26■□□□□ 0.35
LMNA-217ENST00000498722 PIK3CAP42336 1068 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 MTHFRP42898 656 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 MYL6P60660 151 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 TNNC1P63316 161 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 CCDC149Q6ZUS6 474 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 ADGRF2Q8IZF7 708 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
LMNA-217ENST00000498722 PDCL2Q8N4E4 241 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 SMG7Q92540 1137 aaKnown RBP17.26■□□□□ 0.35
LMNA-217ENST00000498722 PGLYRP2Q96PD5 576 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 NUCKS1Q9H1E3 243 aaKnown RBP17.26■□□□□ 0.35
LMNA-217ENST00000498722 CYP4F11Q9HBI6 524 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 NXF1Q9UBU9 619 aaKnown RBP17.26■□□□□ 0.35
LMNA-217ENST00000498722 L1RE1Q9UN81 338 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 MYO10Q9HD67 2058 aa17.26■□□□□ 0.35
LMNA-217ENST00000498722 N4BP1O75113 896 aaKnown RBP17.25■□□□□ 0.35
LMNA-217ENST00000498722 ZMYND10O75800 440 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 GCLMP48507 274 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 KLK7P49862 253 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 CDR1P51861 262 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 CLDN10P78369 228 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 ADCY1Q08828 1119 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 KCNMA1Q12791 1236 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 NCOA4Q13772 614 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 ZNF699Q32M78 642 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 WDR72Q3MJ13 1102 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 TPGS2Q68CL5 300 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 RNF19BQ6ZMZ0 732 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 GBP6Q6ZN66 633 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 GPR149Q86SP6 731 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 TMEM86AQ8N2M4 240 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 C17orf53Q8N3J3 647 aaPredicted RBP17.25■□□□□ 0.35
LMNA-217ENST00000498722 TOP6BLQ8N6T0 577 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 FEZF2Q8TBJ5 459 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 SLC35C1Q96A29 364 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 NECTIN4Q96NY8 510 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 TMEM209Q96SK2 561 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 ZDHHC7Q9NXF8 308 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 GDAP2Q9NXN4 497 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 CEP72Q9P209 647 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 DAAM1Q9Y4D1 1078 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 PTPRDP23468 1912 aa17.25■□□□□ 0.35
LMNA-217ENST00000498722 GOLGA6L9A6NEM1 432 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 CCL16O15467 120 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 ABLIM3O94929 683 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 LRG1P02750 347 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 C4BPAP04003 597 aaKnown RBP17.24■□□□□ 0.35
LMNA-217ENST00000498722 ATF2P15336 505 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 MYL7Q01449 175 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 TSPY1Q01534 308 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 ENPEPQ07075 957 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 SLC39A12Q504Y0 691 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
LMNA-217ENST00000498722 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 CACNA2D4Q7Z3S7 1137 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 OR10T2Q8NGX3 314 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 SUSD6Q92537 303 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 RPGRIP1Q96KN7 1286 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 LSM14BQ9BX40 385 aaKnown RBP17.24■□□□□ 0.35
LMNA-217ENST00000498722 COL25A1Q9BXS0 654 aaPredicted RBP17.24■□□□□ 0.35
LMNA-217ENST00000498722 POMKQ9H5K3 350 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 PLCB1Q9NQ66 1216 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■■■■ 30.4
LMNA-217ENST00000498722 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
LMNA-217ENST00000498722 DDX43Q9NXZ2 648 aaKnown RBP17.24■□□□□ 0.35
LMNA-217ENST00000498722 DOCK8Q8NF50 2099 aa17.24■□□□□ 0.35
LMNA-217ENST00000498722 KIF2AO00139 706 aaPredicted RBP17.23■□□□□ 0.35
LMNA-217ENST00000498722 XYLBO75191 536 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 TUBB4AP04350 444 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 ACAT1P24752 427 aaKnown RBP17.23■□□□□ 0.35
LMNA-217ENST00000498722 ATICP31939 592 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 CDK17Q00537 523 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 MEA1Q16626 185 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 EXOC3L4Q17RC7 722 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 SOWAHAQ2M3V2 549 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 ZACNQ401N2 412 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 ZNF667Q5HYK9 610 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 C1orf220Q5T0J3 134 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 E4F1Q66K89 784 aaPredicted RBP17.23■□□□□ 0.35
LMNA-217ENST00000498722 SCARA5Q6ZMJ2 495 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 SV2AQ7L0J3 742 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 ADHFE1Q8IWW8 467 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 CMASQ8NFW8 434 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms