RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 A1CFQ9NQ94 594 aaKnown RBP5.45□□□□□ -1.54
PTPRK-215ENST00000498284 PAXBP1Q9Y5B6 917 aa5.45□□□□□ -1.54
PTPRK-215ENST00000498284 TMEM233B4DJY2 109 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 TRIAP1O43715 76 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 NBPF7P0C2Y1 421 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-215ENST00000498284 XRCC6P12956 609 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPRK-215ENST00000498284 PIK3CBP42338 1070 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 WNT3P56703 355 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 BLOC1S1P78537 153 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 SF3B3Q15393 1217 aaKnown RBP5.44□□□□□ -1.54
PTPRK-215ENST00000498284 TMEM108Q6UXF1 575 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 USP51Q70EK9 711 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 ULK2Q8IYT8 1036 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 LNX2Q8N448 690 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 SLC30A5Q8TAD4 765 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 SSH3Q8TE77 659 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 NEU4Q8WWR8 484 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-215ENST00000498284 Q96MF0 132 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 MS4A7Q9GZW8 240 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-215ENST00000498284 COL20A1Q9P218 1284 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 SHOC2Q9UQ13 582 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 SNX13Q9Y5W8 968 aa5.44□□□□□ -1.54
PTPRK-215ENST00000498284 RHPN2P1A8MT19 583 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 SRGNP10124 158 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 CD6P30203 668 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 PXNP49023 591 aaPredicted RBP5.43□□□□□ -1.54
PTPRK-215ENST00000498284 LOXL3P58215 753 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 LILRA4P59901 499 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 RPS16P62249 146 aaKnown RBP5.43□□□□□ -1.54
PTPRK-215ENST00000498284 TAP1Q03518 808 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 RBM20Q5T481 1227 aaKnown RBP5.43□□□□□ -1.54
PTPRK-215ENST00000498284 DCAF12L1Q5VU92 463 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 ZNF627Q7L945 461 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 C11orf96Q7Z7L8 435 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 OR56A3Q8NH54 315 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 RAPGEF4Q8WZA2 1011 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 MSLNLQ96KJ4 702 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 STRBPQ96SI9 672 aaKnown RBP5.43□□□□□ -1.54
PTPRK-215ENST00000498284 OSBPL9Q96SU4 736 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 MESP1Q9BRJ9 268 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 NAA15Q9BXJ9 866 aaKnown RBP5.43□□□□□ -1.54
PTPRK-215ENST00000498284 CYP4F11Q9HBI6 524 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 CORO2BQ9UQ03 480 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 DMTF1Q9Y222 760 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 COL4A3Q01955 1670 aa5.43□□□□□ -1.54
PTPRK-215ENST00000498284 PYCARD-AS1I3L0S3 204 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 FOXN3O00409 490 aaPredicted RBP5.42□□□□□ -1.54
PTPRK-215ENST00000498284 PLIN1O60240 522 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 HKR1P10072 659 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 PPP3CBP16298 524 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 ACVRL1P37023 503 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 GDF5P43026 501 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 SATB1Q01826 763 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 PICALMQ13492 652 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 IL31Q6EBC2 164 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 Q6YL49 198 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 Q6ZPA2 131 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 GAS2L3Q86XJ1 694 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPRK-215ENST00000498284 LPIN2Q92539 896 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 TBCBQ99426 244 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 NELL2Q99435 816 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 AIFM2Q9BRQ8 373 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 PTDSS2Q9BVG9 487 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 UNKQ9C0B0 810 aaKnown RBP5.42□□□□□ -1.54
PTPRK-215ENST00000498284 AMBRA1Q9C0C7 1298 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 SYBUQ9NX95 663 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 KCTD5Q9NXV2 234 aa5.42□□□□□ -1.54
PTPRK-215ENST00000498284 GRID2IPA4D2P6 1211 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 MBD3L4A6NDZ8 208 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-215ENST00000498284 MBD3L3A6NE82 208 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-215ENST00000498284 TMEM191CA6NGB0 347 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 F8W8V4 182 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 FSHBP01225 129 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 MYL3P08590 195 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 TGM1P22735 817 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 KLRC1P26715 233 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 AVPR1BP47901 424 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 HNRNPMP52272 730 aaKnown RBP eCLIP5.41□□□□□ -1.542e-6■■■■□ 21.2
PTPRK-215ENST00000498284 ZNF543Q08ER8 600 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 IFIT5Q13325 482 aaKnown RBP5.41□□□□□ -1.54
PTPRK-215ENST00000498284 MGAT5BQ3V5L5 792 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 PLA1AQ53H76 456 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 VPS53Q5VIR6 699 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 SFRP4Q6FHJ7 346 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-215ENST00000498284 VWA1Q6PCB0 445 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 TSHZ1Q6ZSZ6 1077 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 ZNF280BQ86YH2 543 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 FAM109AQ8N4B1 249 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 B3GALNT2Q8NCR0 500 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 LINC00476Q8WZB0 136 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 SPSB4Q96A44 273 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 FAM136AQ96C01 138 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 COQ10AQ96MF6 247 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 STK31Q9BXU1 1019 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 TPSD1Q9BZJ3 242 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 ZSCAN32Q9NX65 697 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 MAST3O60307 1309 aa5.41□□□□□ -1.54
PTPRK-215ENST00000498284 CCDC194A0A1B0GVG4 234 aa5.4□□□□□ -1.54
PTPRK-215ENST00000498284 hCG_1984214I3L0E3 225 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms