RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ANKMY2Q8IV38 441 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZC3H7AQ8IWR0 971 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 IFT20Q8IY31 132 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CD177Q8N6Q3 437 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PDILTQ8N807 584 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZBTB38Q8NAP3 1195 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SH3RF2Q8TEC5 729 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PRPF31Q8WWY3 499 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 HERVK_113Q902F9 699 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CLP1Q92989 425 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ASB9Q96DX5 294 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OXNAD1Q96HP4 312 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 LINC00167Q96N53 147 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TUBGCP5Q96RT8 1024 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CCDC106Q9BWC9 280 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TPSD1Q9BZJ3 242 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.55□□□□□ -2.16
XRN1-214ENST00000498077 RNF41Q9H4P4 317 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SPATA6Q9NWH7 488 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 UPB1Q9UBR1 384 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SUCOQ9UBS9 1254 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 BCAP29Q9UHQ4 241 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FBXO4Q9UKT5 387 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZDHHC8Q9ULC8 765 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SORCS3Q9UPU3 1222 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PAM16Q9Y3D7 125 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KIAA1551Q9HCM1 1747 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 DICER1Q9UPY3 1922 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 COL5A3P25940 1745 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ANKRD26Q9UPS8 1709 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TTC28Q96AY4 2481 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 USP17L5A8MUK1 530 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 POTECB2RU33 542 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PDHXO00330 501 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PIP5K1CO60331 668 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TMEM127O75204 238 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 IPO13O94829 963 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SIX3O95343 332 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 CYP11A1P05108 521 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CD3EP07766 207 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 F7P08709 466 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 MSL3P1P0C860 447 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TCN2P20062 427 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ELK4P28324 431 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GBP1P32455 592 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PRPHP41219 470 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NPTX2P47972 431 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KCNQ1P51787 676 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ENPP2Q13822 863 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RAB3GAP1Q15042 981 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KYNUQ16719 465 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TATDN3Q17R31 274 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LGALSLQ3ZCW2 172 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ODF2Q5BJF6 829 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 HDGFL1Q5TGJ6 251 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RPTNQ6XPR3 784 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TPTE2Q6XPS3 522 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZNF571Q7Z3V5 609 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 PDZD3Q86UT5 571 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TMEM151BQ8IW70 566 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RNF175Q8N4F7 328 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LZTR1Q8N653 840 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PRSS33Q8NF86 280 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CCHCR1Q8TD31 782 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 DNAJC9Q8WXX5 260 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 GNRHR2Q96P88 292 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RASL11BQ9BPW5 248 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ARHGAP39Q9C0H5 1083 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ING2Q9H160 280 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OSBPL3Q9H4L5 887 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 EPB41L5Q9HCM4 733 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 BRD7Q9NPI1 651 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 G3BP2Q9UN86 482 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZBTB1Q9Y2K1 713 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TNS3Q68CZ2 1445 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 AKAP12Q02952 1782 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MBD5Q9P267 1494 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PTPRZ1P23471 2315 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 TRAV8-4A0A0B4J246 113 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 LOC102724428A0A0B4J2F2 783 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 FAM221BA6H8Z2 402 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DPPA5A6NC42 116 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RBMY1BA6NDE4 496 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 RBMY1EA6NEQ0 496 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 A6NJR5 290 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DCDC2CA8MYV0 355 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MASP2O00187 686 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PIK3CDO00329 1044 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PPP6CO00743 305 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 BCAR3O75815 825 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MICAL2O94851 1124 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RAB3DO95716 219 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 IL2RAP01589 272 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 P01737 135 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 C9P02748 559 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RBMY1DP0C7P1 496 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 RBMY1A1P0DJD3 496 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 HSD17B1P14061 328 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 EDN3P14138 238 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DRD2P14416 443 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms