RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CIZ1Q9ULV3 898 aaPredicted RBP19.96■□□□□ 0.79
PRKCB-209ENST00000498058 OTOL1A6NHN0 477 aaPredicted RBP19.95■□□□□ 0.78
PRKCB-209ENST00000498058 CHURC1-FNTBB4DL54 471 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 TULP1O00294 542 aaPredicted RBP19.95■□□□□ 0.78
PRKCB-209ENST00000498058 HRO43593 1189 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 GARTP22102 1010 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 FNTBP49356 437 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 NLRP12P59046 1061 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 NUCB2P80303 420 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 CCINQ13939 588 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 SLC39A14Q15043 492 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 LMBRD2Q68DH5 695 aaPredicted RBP19.95■□□□□ 0.78
PRKCB-209ENST00000498058 PKN3Q6P5Z2 889 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 RALGPS2Q86X27 583 aaPredicted RBP19.95■□□□□ 0.78
PRKCB-209ENST00000498058 DCP1BQ8IZD4 617 aaKnown RBP19.95■□□□□ 0.78
PRKCB-209ENST00000498058 CMTM8Q8IZV2 173 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 HPS3Q969F9 1004 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 MSANTD3Q96H12 275 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 ZNF560Q96MR9 790 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 PDE11AQ9HCR9 933 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 HPS4Q9NQG7 708 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 PANK4Q9NVE7 773 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 RBAKQ9NYW8 714 aaPredicted RBP19.95■□□□□ 0.78
PRKCB-209ENST00000498058 EXOC7Q9UPT5 735 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 PCDHB5Q9Y5E4 795 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 MORC2Q9Y6X9 1032 aaPredicted RBP19.95■□□□□ 0.78
PRKCB-209ENST00000498058 PTPRJQ12913 1337 aa19.95■□□□□ 0.78
PRKCB-209ENST00000498058 ANAPC1Q9H1A4 1944 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 TADA3O75528 432 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 SMARCB1Q12824 385 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 DDR2Q16832 855 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 TXNDC8Q6A555 127 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 TRIM68Q6AZZ1 485 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 CSGALNACT2Q8N6G5 542 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 PDILTQ8N807 584 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 MAB21L3Q8N8X9 362 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 USP13Q92995 863 aaPredicted RBP19.94■□□□□ 0.78
PRKCB-209ENST00000498058 FAM83CQ9BQN1 747 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 GKN1Q9NS71 199 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 DDX43Q9NXZ2 648 aaKnown RBP19.94■□□□□ 0.78
PRKCB-209ENST00000498058 GREB1Q4ZG55 1949 aa19.94■□□□□ 0.78
PRKCB-209ENST00000498058 EXTL3O43909 919 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 PRPF40AO75400 957 aaKnown RBP19.93■□□□□ 0.78
PRKCB-209ENST00000498058 CYP2F1P24903 491 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 HOXD13P35453 343 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 PNPLA4P41247 253 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 STAT6P42226 847 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 NRLP54845 237 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 BFSP1Q12934 665 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 LRRC32Q14392 662 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 INTS6LQ5JSJ4 861 aaKnown RBP19.93■□□□□ 0.78
PRKCB-209ENST00000498058 CCDC73Q6ZRK6 1079 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 CELF5Q8N6W0 485 aaKnown RBP19.93■□□□□ 0.78
PRKCB-209ENST00000498058 MTMR12Q9C0I1 747 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 GTF3C4Q9UKN8 822 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 MAGED2Q9UNF1 606 aaPredicted RBP19.93■□□□□ 0.78
PRKCB-209ENST00000498058 PCDHB13Q9Y5F0 798 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 NCOR2Q9Y618 2525 aa19.93■□□□□ 0.78
PRKCB-209ENST00000498058 PAPSS2O95340 614 aaPredicted RBP19.92■□□□□ 0.78
PRKCB-209ENST00000498058 TXLNAP40222 546 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 ATXN1P54253 815 aaKnown RBP19.92■□□□□ 0.78
PRKCB-209ENST00000498058 SPEM2Q0P670 501 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 TAF12Q16514 161 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 ITPRIPL2Q3MIP1 535 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 DGKKQ5KSL6 1271 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 NAIF1Q69YI7 327 aaPredicted RBP19.92■□□□□ 0.78
PRKCB-209ENST00000498058 HEATR6Q6AI08 1181 aaKnown RBP19.92■□□□□ 0.78
PRKCB-209ENST00000498058 C1orf228Q6PIY5 440 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 SYCP3Q8IZU3 236 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 LRRC52Q8N7C0 313 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 OR5B17Q8NGF7 314 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 NOC3LQ8WTT2 800 aaKnown RBP19.92■□□□□ 0.78
PRKCB-209ENST00000498058 LEO1Q8WVC0 666 aaPredicted RBP19.92■□□□□ 0.78
PRKCB-209ENST00000498058 GCNAQ96QF7 691 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 ACBD6Q9BR61 282 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 ZSCAN16Q9H4T2 348 aaPredicted RBP19.92■□□□□ 0.78
PRKCB-209ENST00000498058 GDAP2Q9NXN4 497 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 SNX9Q9Y5X1 595 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 RALGAPA1Q6GYQ0 2036 aa19.92■□□□□ 0.78
PRKCB-209ENST00000498058 SPTBN2O15020 2390 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 GABRDO14764 452 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 ATP2C2O75185 946 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 LDHAP00338 332 aaKnown RBP19.91■□□□□ 0.78
PRKCB-209ENST00000498058 ZSCAN22P10073 491 aaPredicted RBP19.91■□□□□ 0.78
PRKCB-209ENST00000498058 ARSAP15289 507 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 NASPP49321 788 aaPredicted RBP19.91■□□□□ 0.78
PRKCB-209ENST00000498058 PLCB2Q00722 1185 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 TSPY1Q01534 308 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 E2F4Q16254 413 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 SOWAHAQ2M3V2 549 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 FSTL4Q6MZW2 842 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 PRR23BQ6ZRT6 265 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 CACTINQ8WUQ7 758 aaKnown RBP19.91■□□□□ 0.78
PRKCB-209ENST00000498058 SLC22A12Q96S37 553 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 EBF3Q9H4W6 596 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 FBRSL1Q9HCM7 1045 aaKnown RBP19.91■□□□□ 0.78
PRKCB-209ENST00000498058 POLR3BQ9NW08 1133 aaPredicted RBP19.91■□□□□ 0.78
PRKCB-209ENST00000498058 CHMP5Q9NZZ3 219 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 USP18Q9UMW8 372 aa19.91■□□□□ 0.78
PRKCB-209ENST00000498058 SDK1Q7Z5N4 2213 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms