RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 B3GNT5Q9BYG0 378 aa16.97■□□□□ 0.31
PTK7-220ENST00000497957 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
PTK7-220ENST00000497957 SALL4Q9UJQ4 1053 aa16.97■□□□□ 0.31
PTK7-220ENST00000497957 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTK7-220ENST00000497957 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.97■□□□□ 0.31
PTK7-220ENST00000497957 CCDC175P0C221 793 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 UNGP13051 313 aaPredicted RBP16.96■□□□□ 0.31
PTK7-220ENST00000497957 TYMPP19971 482 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 GALCP54803 685 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 SGO2Q562F6 1265 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 PRSS55Q6UWB4 352 aaPredicted RBP16.96■□□□□ 0.31
PTK7-220ENST00000497957 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 B3GALNT2Q8NCR0 500 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 IGSF21Q96ID5 467 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 ZNF558Q96NG5 402 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 PKMYT1Q99640 499 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 IRX2Q9BZI1 471 aaPredicted RBP16.96■□□□□ 0.31
PTK7-220ENST00000497957 LZTFL1Q9NQ48 299 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 TMEM30AQ9NV96 361 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
PTK7-220ENST00000497957 H0YGN5 161 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 M0QYV0 167 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 ADAM12O43184 909 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 GABBR2O75899 941 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 FTLP02792 175 aaPredicted RBP16.95■□□□□ 0.3
PTK7-220ENST00000497957 ABCB4P21439 1286 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 FGFR3P22607 806 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 VAV2P52735 878 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 CACNA2D1P54289 1103 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 SPA17Q15506 151 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 VARS2Q5ST30 1063 aaKnown RBP16.95■□□□□ 0.3
PTK7-220ENST00000497957 ACAD10Q6JQN1 1059 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 KIAA1328Q86T90 577 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 METTL23Q86XA0 190 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 ZNF677Q86XU0 584 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 FMNL3Q8IVF7 1028 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 SLC2A14Q8TDB8 520 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 SLC9A7Q96T83 725 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 PDCL3Q9H2J4 239 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 GTF3C4Q9UKN8 822 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 PCDHGC3Q9UN70 934 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 PAXBP1Q9Y5B6 917 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
PTK7-220ENST00000497957 PIK3R2O00459 728 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 TLL1O43897 1013 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 BEST1O76090 585 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 GJB6O95452 261 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 FAM163BP0C2L3 166 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 ANXA13P27216 316 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 LHX1P48742 406 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 ALDH7A1P49419 539 aaKnown RBP16.94■□□□□ 0.3
PTK7-220ENST00000497957 PTP4A2Q12974 167 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 MRPL58Q14197 206 aaKnown RBP16.94■□□□□ 0.3
PTK7-220ENST00000497957 CNGA2Q16280 664 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 PKDCCQ504Y2 493 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 INTS6LQ5JSJ4 861 aaKnown RBP16.94■□□□□ 0.3
PTK7-220ENST00000497957 ARHGAP17Q68EM7 881 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 LCLAT1Q6UWP7 414 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 RNF168Q8IYW5 571 aaPredicted RBP16.94■□□□□ 0.3
PTK7-220ENST00000497957 FUKQ8N0W3 1084 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 FIBCD1Q8N539 461 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 TTC39CQ8N584 583 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
PTK7-220ENST00000497957 AUTS2Q8WXX7 1259 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 SECISBP2LQ93073 1101 aaKnown RBP16.94■□□□□ 0.3
PTK7-220ENST00000497957 RNPC3Q96LT9 517 aaKnown RBP16.94■□□□□ 0.3
PTK7-220ENST00000497957 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 THAP2Q9H0W7 228 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 ISCUQ9H1K1 167 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 GBF1Q92538 1859 aa16.94■□□□□ 0.3
PTK7-220ENST00000497957 SF3B1O75533 1304 aaKnown RBP eCLIP16.94■□□□□ 0.38e-6■■■■■ 107
PTK7-220ENST00000497957 RTN2O75298 545 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 RPL17P18621 184 aaKnown RBP16.93■□□□□ 0.3
PTK7-220ENST00000497957 LAG3P18627 525 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 RGS7P49802 495 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 YWHAHQ04917 246 aaPredicted RBP16.93■□□□□ 0.3
PTK7-220ENST00000497957 MMS22LQ6ZRQ5 1243 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 VPS36Q86VN1 386 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 MYLPFQ96A32 169 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 RAD9AQ99638 391 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 C11orf70Q9BRQ4 267 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 FAM124BQ9H5Z6 455 aaPredicted RBP16.93■□□□□ 0.3
PTK7-220ENST00000497957 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 SPG21Q9NZD8 308 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 CDH9Q9ULB4 789 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 INSL6Q9Y581 213 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 NLRC5Q86WI3 1866 aa16.93■□□□□ 0.3
PTK7-220ENST00000497957 LINC01553A4QN01 128 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 C2CD2LO14523 706 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 SYN3O14994 580 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 PJA2O43164 708 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 MED7O43513 233 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 OAZ2O95190 189 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 CSPG5O95196 566 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 VNN2O95498 520 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 H2AFZP0C0S5 128 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 MSNP26038 577 aaKnown RBP16.92■□□□□ 0.3
PTK7-220ENST00000497957 CDH5P33151 784 aaPredicted RBP16.92■□□□□ 0.3
PTK7-220ENST00000497957 PBX2P40425 430 aa16.92■□□□□ 0.3
PTK7-220ENST00000497957 GPD2P43304 727 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms