RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 APBA1Q02410 837 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 KLHDC7AQ5VTJ3 777 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 GJB7Q6PEY0 223 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 UNC93AQ86WB7 457 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 CLSTN3Q9BQT9 956 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 TRIM5Q9C035 493 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 XPO4Q9C0E2 1151 aaKnown RBP21.37■■□□□ 1.01
CTSD-206ENST00000497544 FAM124BQ9H5Z6 455 aaPredicted RBP21.37■■□□□ 1.01
CTSD-206ENST00000497544 NSUN3Q9H649 340 aaKnown RBP21.37■■□□□ 1.01
CTSD-206ENST00000497544 SIX2Q9NPC8 291 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 PLCB1Q9NQ66 1216 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 CISHQ9NSE2 258 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 FAM207AQ9NSI2 230 aaPredicted RBP21.37■■□□□ 1.01
CTSD-206ENST00000497544 DNAJC12Q9UKB3 198 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 BARX2Q9UMQ3 279 aaPredicted RBP21.37■■□□□ 1.01
CTSD-206ENST00000497544 CDY1Q9Y6F8 540 aa21.37■■□□□ 1.01
CTSD-206ENST00000497544 A0A1W2PQC6 194 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 TBC1D4O60343 1298 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 KRT37O76014 449 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 ADH1AP07327 375 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 ACAT1P24752 427 aaKnown RBP21.36■■□□□ 1.01
CTSD-206ENST00000497544 NDUFV1P49821 464 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 KLK7P49862 253 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 NDST1P52848 882 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 ARHGAP44Q17R89 818 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 RBM23Q86U06 439 aaKnown RBP21.36■■□□□ 1.01
CTSD-206ENST00000497544 EDAQ92838 391 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 KAT5Q92993 513 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 PBXIP1Q96AQ6 731 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 ARID3AQ99856 593 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 RTP3Q9BQQ7 232 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 CDH9Q9ULB4 789 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 PCDHB4Q9Y5E5 795 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 FAM186AA6NE01 2351 aa21.36■■□□□ 1.01
CTSD-206ENST00000497544 PER2O15055 1255 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 CPB1P15086 417 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 UCHL3P15374 230 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 SLC8B1Q6J4K2 584 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 SARM1Q6SZW1 724 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 RSPO2Q6UXX9 243 aaPredicted RBP21.35■■□□□ 1.01
CTSD-206ENST00000497544 ADGRD2Q7Z7M1 963 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 PPFIBP1Q86W92 1011 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 PALB2Q86YC2 1186 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 DCP1BQ8IZD4 617 aaKnown RBP21.35■■□□□ 1.01
CTSD-206ENST00000497544 OR10T2Q8NGX3 314 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 JAKMIP2Q96AA8 810 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 TNIP3Q96KP6 325 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 KREMEN1Q96MU8 473 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 SYT15Q9BQS2 421 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 NT5C1AQ9BXI3 368 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 FAM50BQ9Y247 325 aa21.35■■□□□ 1.01
CTSD-206ENST00000497544 RIF1Q5UIP0 2472 aaKnown RBP21.35■■□□□ 1.01
CTSD-206ENST00000497544 TMEM221A6NGB7 291 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 M0R296 226 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 ADAM12O43184 909 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 HCRTO43612 131 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 CILPO75339 1184 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 RFX1P22670 979 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 POLR2FP61218 127 aaKnown RBP21.34■■□□□ 1.01
CTSD-206ENST00000497544 INCA1Q0VD86 236 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 RAPGEF1Q13905 1077 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 RAB33AQ14088 237 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 PTPN21Q16825 1174 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 ZNF394Q53GI3 561 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 INTS6LQ5JSJ4 861 aaKnown RBP21.34■■□□□ 1.01
CTSD-206ENST00000497544 DPY19L2P1Q6NXN4 242 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 TMEM209Q96SK2 561 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 ZCWPW1Q9H0M4 648 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 DAAM1Q9Y4D1 1078 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 TSC2P49815 1807 aa21.34■■□□□ 1.01
CTSD-206ENST00000497544 ATG2AQ2TAZ0 1938 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 CLASP2O75122 1294 aaKnown RBP21.33■■□□□ 1.01
CTSD-206ENST00000497544 OR4Q2P0C623 313 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 PTPN1P18031 435 aaKnown RBP21.33■■□□□ 1.01
CTSD-206ENST00000497544 NRIP1P48552 1158 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 ROR1Q01973 937 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 MAPRE1Q15691 268 aaKnown RBP21.33■■□□□ 1.01
CTSD-206ENST00000497544 TCEAL5Q5H9L2 206 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 IQCEQ6IPM2 695 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 TMEM270Q6UE05 265 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 ASCL5Q7RTU5 278 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 ACOT1Q86TX2 421 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 RNF135Q8IUD6 432 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 SUGP1Q8IWZ8 645 aaKnown RBP21.33■■□□□ 1.01
CTSD-206ENST00000497544 ATOH1Q92858 354 aaPredicted RBP21.33■■□□□ 1.01
CTSD-206ENST00000497544 CDCA3Q99618 268 aaPredicted RBP21.33■■□□□ 1.01
CTSD-206ENST00000497544 NUP58Q9BVL2 599 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 GANQ9H2C0 597 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 IGFLR1Q9H665 355 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 GTF3C4Q9UKN8 822 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 NME7Q9Y5B8 376 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 FHOD1Q9Y613 1164 aa21.33■■□□□ 1.01
CTSD-206ENST00000497544 KMT2BQ9UMN6 2715 aaPredicted RBP21.33■■□□□ 1
CTSD-206ENST00000497544 ATP2C2O75185 946 aa21.32■■□□□ 1
CTSD-206ENST00000497544 NOL4O94818 638 aa21.32■■□□□ 1
CTSD-206ENST00000497544 KRT5P13647 590 aa21.32■■□□□ 1
CTSD-206ENST00000497544 ELF1P32519 619 aa21.32■■□□□ 1
CTSD-206ENST00000497544 USP8P40818 1118 aa21.32■■□□□ 1
CTSD-206ENST00000497544 PSMC1P62191 440 aaKnown RBP21.32■■□□□ 1
CTSD-206ENST00000497544 SMARCB1Q12824 385 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms