RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 ZNF606Q8WXB4 792 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 PKMYT1Q99640 499 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 BAG1Q99933 345 aaPredicted RBP19.43■□□□□ 0.7
RGP1-202ENST00000496906 LPIN3Q9BQK8 851 aa19.43■□□□□ 0.7
RGP1-202ENST00000496906 OXCT2Q9BYC2 517 aaPredicted RBP19.43■□□□□ 0.7
RGP1-202ENST00000496906 PLXNA4Q9HCM2 1894 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 SSU72P8A0A1W2PR75 194 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 OR6C75A6NL08 312 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 CTSAP10619 480 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 TSPY1Q01534 308 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
RGP1-202ENST00000496906 PSMD5Q16401 504 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 SGO2Q562F6 1265 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 FAM171BQ6P995 826 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 RSPO2Q6UXX9 243 aaPredicted RBP19.42■□□□□ 0.7
RGP1-202ENST00000496906 CYP26C1Q6V0L0 522 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 ZNF677Q86XU0 584 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 POF1BQ8WVV4 589 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 ZCWPW1Q9H0M4 648 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 SLC28A3Q9HAS3 691 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 FAM49BQ9NUQ9 324 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 BACE2Q9Y5Z0 518 aa19.42■□□□□ 0.7
RGP1-202ENST00000496906 MYBPHLA2RUH7 354 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 O00370 1275 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 C2CD2LO14523 706 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 CHRNB2P17787 502 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 FMO1Q01740 532 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 CDR2Q01850 454 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 PTPN14Q15678 1187 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 MDH1BQ5I0G3 518 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 TAF3Q5VWG9 929 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 ARHGAP17Q68EM7 881 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 LRRTM3Q86VH5 581 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 TMTC1Q8IUR5 882 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 CCDC112Q8NEF3 446 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 FBXO22Q8NEZ5 403 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 TIFAQ96CG3 184 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 AGPAT1Q99943 283 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 NHEJ1Q9H9Q4 299 aaPredicted RBP19.41■□□□□ 0.7
RGP1-202ENST00000496906 GTF3C4Q9UKN8 822 aa19.41■□□□□ 0.7
RGP1-202ENST00000496906 H3BNC9 293 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 LILRB3O75022 631 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 MMEP08473 750 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 OR4Q2P0C623 313 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 CCDC130P13994 396 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 DNAJB1P25685 340 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 EIF4A3P38919 411 aaKnown RBP19.4■□□□□ 0.7
RGP1-202ENST00000496906 CCZ1BP86790 482 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 CCZ1P86791 482 aaPredicted RBP19.4■□□□□ 0.7
RGP1-202ENST00000496906 LRIT3Q3SXY7 679 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 PPP1R26Q5T8A7 1209 aaPredicted RBP19.4■□□□□ 0.7
RGP1-202ENST00000496906 SLC8B1Q6J4K2 584 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 MYCBPAPQ8TBZ2 947 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 AUTS2Q8WXX7 1259 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 CYFIP2Q96F07 1278 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 KCNF1Q9H3M0 494 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 CERS4Q9HA82 394 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 MRPL17Q9NRX2 175 aaKnown RBP19.4■□□□□ 0.7
RGP1-202ENST00000496906 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.4■□□□□ 0.7
RGP1-202ENST00000496906 CHD9Q3L8U1 2897 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 SOWAHDA6NJG2 315 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 GRM6O15303 877 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 MED7O43513 233 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 CFHP08603 1231 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 ANXA13P27216 316 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 GPM6BQ13491 265 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 STILQ15468 1287 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 MAPRE1Q15691 268 aaKnown RBP19.4■□□□□ 0.7
RGP1-202ENST00000496906 CNGA2Q16280 664 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 ASTE1Q2TB18 679 aaPredicted RBP19.4■□□□□ 0.7
RGP1-202ENST00000496906 DCP1BQ8IZD4 617 aaKnown RBP19.4■□□□□ 0.7
RGP1-202ENST00000496906 MYLPFQ96A32 169 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 PCED1BQ96HM7 432 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 TCF25Q9BQ70 676 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 TLR9Q9NR96 1032 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 TMLHEQ9NVH6 421 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 TSPAN16Q9UKR8 245 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 PCDHGC3Q9UN70 934 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 SSX2IPQ9Y2D8 614 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 CDY1Q9Y6F8 540 aa19.4■□□□□ 0.7
RGP1-202ENST00000496906 RPL17P18621 184 aaKnown RBP19.39■□□□□ 0.69
RGP1-202ENST00000496906 SSTR3P32745 418 aaPredicted RBP19.39■□□□□ 0.69
RGP1-202ENST00000496906 ERVFC1P60507 584 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 CAMK1Q14012 370 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 BMS1Q14692 1282 aaKnown RBP19.39■□□□□ 0.69
RGP1-202ENST00000496906 LCLAT1Q6UWP7 414 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 TMC7Q7Z402 723 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 GLYCTKQ8IVS8 523 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 FUKQ8N0W3 1084 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 SLC2A14Q8TDB8 520 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 ARNTL2Q8WYA1 636 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 CCDC42Q96M95 316 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 HNRNPABQ99729 332 aaKnown RBP19.39■□□□□ 0.69
RGP1-202ENST00000496906 CLSTN3Q9BQT9 956 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 RXFP1Q9HBX9 757 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.39■□□□□ 0.69
RGP1-202ENST00000496906 IRAK3Q9Y616 596 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 CHD7Q9P2D1 2997 aa19.39■□□□□ 0.69
RGP1-202ENST00000496906 DDX3XO00571 662 aaKnown RBP eCLIP19.38■□□□□ 0.691e-11■■■■□ 22.1
RGP1-202ENST00000496906 FSCN2O14926 492 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms