RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 RAB23Q9ULC3 237 aa13.31□□□□□ -0.28
VPS72-206ENST00000496809 L1RE1Q9UN81 338 aa13.31□□□□□ -0.28
VPS72-206ENST00000496809 SNX9Q9Y5X1 595 aa13.31□□□□□ -0.28
VPS72-206ENST00000496809 GVINP1Q7Z2Y8 2422 aa13.31□□□□□ -0.28
VPS72-206ENST00000496809 A0A087X0B3 334 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 SPECC1L-ADORA2AF8WAN1 911 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 CTHP32929 405 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 NLRP12P59046 1061 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 ASIC1P78348 528 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 CYP4F8P98187 520 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 MAPRE1Q15691 268 aaKnown RBP13.3□□□□□ -0.28
VPS72-206ENST00000496809 ITPRIPL2Q3MIP1 535 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 CFAP221Q4G0U5 840 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
VPS72-206ENST00000496809 ATL3Q6DD88 541 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 CC2D1AQ6P1N0 951 aaPredicted RBP13.3□□□□□ -0.28
VPS72-206ENST00000496809 CNNM4Q6P4Q7 775 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
VPS72-206ENST00000496809 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 SNX21Q969T3 373 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 RSPRY1Q96DX4 576 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
VPS72-206ENST00000496809 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 SLC46A2Q9BY10 475 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 TDP1Q9NUW8 608 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 INTS13Q9NVM9 706 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
VPS72-206ENST00000496809 COL4A3Q01955 1670 aa13.3□□□□□ -0.28
VPS72-206ENST00000496809 PATJQ8NI35 1801 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 SPTBN4Q9H254 2564 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 CACNA1IQ9P0X4 2223 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 GABRDO14764 452 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 F11P03951 625 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 HMGA1P17096 107 aaKnown RBP13.29□□□□□ -0.28
VPS72-206ENST00000496809 CNR2P34972 360 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 E2F4Q16254 413 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 TSSK4Q6SA08 328 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 WDR49Q8IV35 697 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 DHX58Q96C10 678 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
VPS72-206ENST00000496809 HPDLQ96IR7 371 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 CEP295NLQ96MC4 621 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 MTMR12Q9C0I1 747 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 GTSE1Q9NYZ3 720 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 EHD2Q9NZN4 543 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 CGNQ9P2M7 1197 aaKnown RBP13.29□□□□□ -0.28
VPS72-206ENST00000496809 GMEB2Q9UKD1 530 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 MAGED2Q9UNF1 606 aaPredicted RBP13.29□□□□□ -0.28
VPS72-206ENST00000496809 SMG5Q9UPR3 1016 aaKnown RBP13.29□□□□□ -0.28
VPS72-206ENST00000496809 NCANO14594 1321 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 UBE4BO95155 1302 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 TSC2P49815 1807 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 ANK1P16157 1881 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 FANCMQ8IYD8 2048 aa13.29□□□□□ -0.28
VPS72-206ENST00000496809 PAPSS2O95340 614 aaPredicted RBP13.28□□□□□ -0.28
VPS72-206ENST00000496809 PRAMEF12O95522 483 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 MAGEA11P43364 429 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 PDE6CP51160 858 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 WNT7BP56706 349 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 ZNF268Q14587 947 aaPredicted RBP13.28□□□□□ -0.28
VPS72-206ENST00000496809 PUM1Q14671 1186 aaKnown RBP eCLIP13.28□□□□□ -0.28
VPS72-206ENST00000496809 SOWAHAQ2M3V2 549 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 FAM26FQ5R3K3 315 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 HS2ST1Q7LGA3 356 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 HSCBQ8IWL3 235 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 ZSWIM2Q8NEG5 633 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 ZNF507Q8TCN5 953 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 ZFYVE19Q96K21 471 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 LRRC3BQ96PB8 259 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 FNBP1Q96RU3 617 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 C7orf25Q9BPX7 421 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 GKN1Q9NS71 199 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 TMLHEQ9NVH6 421 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 SIX4Q9UIU6 781 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 GTF3C4Q9UKN8 822 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 TICRRQ7Z2Z1 1910 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 SCN1AP35498 2009 aa13.28□□□□□ -0.28
VPS72-206ENST00000496809 EP300Q09472 2414 aaPredicted RBP13.28□□□□□ -0.28
VPS72-206ENST00000496809 PRR5-ARHGAP8B1AHC4 643 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 ATG13O75143 517 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 NOL4O94818 638 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 FAM163BP0C2L3 166 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 USP17L7P0C7H9 530 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 TDGF1P13385 188 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 TNNI1P19237 187 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
VPS72-206ENST00000496809 CYP2F1P24903 491 aa13.27□□□□□ -0.29
VPS72-206ENST00000496809 HOXA6P31267 233 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms