RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SRRTQ9BXP5 876 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 NIF3L1Q9GZT8 377 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 CYP3A43Q9HB55 503 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 RAB20Q9NX57 234 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 GTF3C4Q9UKN8 822 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 SLC27A5Q9Y2P5 690 aa20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 MRPS23Q9Y3D9 190 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-213ENST00000496785 DCXO43602 365 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 MICAL2O94851 1124 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 PDGFRBP09619 1106 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 TAF12Q16514 161 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 FAM171BQ6P995 826 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 UNC93AQ86WB7 457 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 FAM200AQ8TCP9 573 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 NXPE3Q969Y0 559 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 PKMYT1Q99640 499 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 CRISPLD1Q9H336 500 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 FAM124BQ9H5Z6 455 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 SMYD3Q9H7B4 428 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 HCFC1R1Q9NWW0 138 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 CEP72Q9P209 647 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 EPS15L1Q9UBC2 864 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 MAGEC2Q9UBF1 373 aaPredicted RBP20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 CDH7Q9ULB5 785 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 TTC28Q96AY4 2481 aa20.55■□□□□ 0.88
CTDSP1-213ENST00000496785 ATP8B3O60423 1300 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 PMM2O15305 246 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 P4HA2O15460 535 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 PTMSP20962 102 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 LMO2P25791 158 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 MAGEA11P43364 429 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 PSMC1P62191 440 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 NTHL1P78549 312 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 CCDC183Q5T5S1 534 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 VSTM1Q6UX27 236 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 RBM43Q6ZSC3 357 aaKnown RBP20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 FAM114A1Q8IWE2 563 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 TTC9BQ8N6N2 239 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 MYCBPAPQ8TBZ2 947 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 PSMG2Q969U7 264 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 CEP295NLQ96MC4 621 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 PI4K2AQ9BTU6 479 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 TMLHEQ9NVH6 421 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 IGSF9Q9P2J2 1179 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 COQ4Q9Y3A0 265 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 NCOR1O75376 2440 aa20.54■□□□□ 0.88
CTDSP1-213ENST00000496785 MYBPHLA2RUH7 354 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 CSH1P0DML2 217 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 CSH2P0DML3 217 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 PTPN1P18031 435 aaKnown RBP20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 FMO5P49326 533 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 EPHA5P54756 1037 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 DPCR1Q3MIW9 517 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 CBWD6Q4V339 395 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 CBWD3Q5JTY5 395 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 CBWD5Q5RIA9 395 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 SASS6Q6UVJ0 657 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 TRIM59Q8IWR1 403 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 B3GALNT2Q8NCR0 500 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 BCO2Q9BYV7 579 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 GDE1Q9NZC3 331 aa20.53■□□□□ 0.88
CTDSP1-213ENST00000496785 LAMP2P13473 410 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 ASPAP45381 313 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 CYP27A1Q02318 531 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 PTPN21Q16825 1174 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 MDH1BQ5I0G3 518 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 SPOPLQ6IQ16 392 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 MTSS1LQ765P7 747 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 FGF13Q92913 245 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 MYLPFQ96A32 169 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 GCNAQ96QF7 691 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 MYADMQ96S97 322 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 GPR88Q9GZN0 384 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 ELOVL4Q9GZR5 314 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 DNAJC25Q9H1X3 360 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 CRTAC1Q9NQ79 661 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 LIMD1Q9UGP4 676 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 SORCS3Q9UPU3 1222 aa20.52■□□□□ 0.88
CTDSP1-213ENST00000496785 PI4K2BG5E9Z4 385 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 HCRTO43612 131 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 ATP2C2O75185 946 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 MYL4P12829 197 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 ATF6P18850 670 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 ANXA13P27216 316 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 RAP1GAPP47736 663 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 CDH8P55286 799 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 YWHAEP62258 255 aaKnown RBP20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 INCA1Q0VD86 236 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 MTMR3Q13615 1198 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 DNAJB7Q7Z6W7 309 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 NPAS3Q8IXF0 933 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 ITFG1Q8TB96 612 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 PCED1BQ96HM7 432 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 THAP9Q9H5L6 903 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 EHD2Q9NZN4 543 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 MUTYHQ9UIF7 546 aa20.51■□□□□ 0.87
CTDSP1-213ENST00000496785 TRIM66O15016 1216 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 SOAT2O75908 522 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 AFPP02771 609 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms