RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.77□□□□□ -1.65
CD46-218ENST00000496723 SPATA31A3Q5VYP0 1347 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 A0A0B4J269 797 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 MGST3O14880 152 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 DNAJB5O75953 348 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 UNC5CO95185 931 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 PIM1P11309 404 aaPredicted RBP4.76□□□□□ -1.65
CD46-218ENST00000496723 PPP3CBP16298 524 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 ITGALP20701 1170 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 ABCG1P45844 678 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 NDUFV1P49821 464 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 TOB1P50616 345 aaPredicted RBP4.76□□□□□ -1.65
CD46-218ENST00000496723 AGFG1P52594 562 aaKnown RBP4.76□□□□□ -1.65
CD46-218ENST00000496723 TUBB3Q13509 450 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 FAM160B1Q5W0V3 765 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 VWA1Q6PCB0 445 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 COL23A1Q86Y22 540 aaPredicted RBP4.76□□□□□ -1.65
CD46-218ENST00000496723 TOR1AIP2Q8NFQ8 470 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 MRGPRX1Q96LB2 322 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 C1QTNF7Q9BXJ2 289 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 B3GNT5Q9BYG0 378 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 C1orf112Q9NSG2 853 aa4.76□□□□□ -1.65
CD46-218ENST00000496723 PIH1D1Q9NWS0 290 aaKnown RBP4.76□□□□□ -1.65
CD46-218ENST00000496723 A0A1W2PPL8 197 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 ERC2O15083 957 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 PROM1O43490 865 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 TRIAP1O43715 76 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 FOLR3P41439 243 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 GCLCP48506 637 aaPredicted RBP4.75□□□□□ -1.65
CD46-218ENST00000496723 KRTAP10-9P60411 292 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 BOP1Q14137 746 aaKnown RBP4.75□□□□□ -1.65
CD46-218ENST00000496723 LLGL1Q15334 1064 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 AMOTQ4VCS5 1084 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 KIAA1614Q5VZ46 1190 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 C1QL2Q7Z5L3 287 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 B3GALNT2Q8NCR0 500 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 MYCBPAPQ8TBZ2 947 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 FBXL20Q96IG2 436 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 SLC46A1Q96NT5 459 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 P2RX7Q99572 595 aaKnown RBP4.75□□□□□ -1.65
CD46-218ENST00000496723 SLC29A3Q9BZD2 475 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 TTYH3Q9C0H2 523 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 KLK15Q9H2R5 256 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 ZMAT3Q9HA38 289 aaKnown RBP4.75□□□□□ -1.65
CD46-218ENST00000496723 METTL14Q9HCE5 456 aaKnown RBP4.75□□□□□ -1.65
CD46-218ENST00000496723 RNF7Q9UBF6 113 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 ARPP21Q9UBL0 812 aaPredicted RBP4.75□□□□□ -1.65
CD46-218ENST00000496723 MED16Q9Y2X0 877 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 PLEKHM1Q9Y4G2 1056 aa4.75□□□□□ -1.65
CD46-218ENST00000496723 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD46-218ENST00000496723 GOLGA6CA6NDK9 693 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 GOLGA6BA6NDN3 693 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 FAM227AF5H4B4 570 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 SOAT2O75908 522 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 GRPP07492 148 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 GOLGA6DP0CG33 693 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 KITP10721 976 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 NPR1P16066 1061 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 CTGFP29279 349 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 HNRNPMP52272 730 aaKnown RBP eCLIP4.74□□□□□ -1.65
CD46-218ENST00000496723 GPSM2P81274 684 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 RBM20Q5T481 1227 aaKnown RBP4.74□□□□□ -1.65
CD46-218ENST00000496723 KAZNQ674X7 775 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 PTF1AQ7RTS3 328 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 C14orf80Q86SX3 495 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 WDR75Q8IWA0 830 aaKnown RBP4.74□□□□□ -1.65
CD46-218ENST00000496723 TFAP2BQ92481 460 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 PGBD1Q96JS3 809 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 UROC1Q96N76 676 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 OSBPL9Q96SU4 736 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 TIMP4Q99727 224 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 TPSD1Q9BZJ3 242 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 TMEM60Q9H2L4 133 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 GOLGA6AQ9NYA3 693 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 HESX1Q9UBX0 185 aa4.74□□□□□ -1.65
CD46-218ENST00000496723 DDX20Q9UHI6 824 aaKnown RBP4.74□□□□□ -1.65
CD46-218ENST00000496723 CCDC151A5D8V7 595 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 CAPN8A6NHC0 703 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 VSTM5A8MXK1 200 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 DCLK1O15075 740 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 MPPED1O15442 326 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 PHGDHO43175 533 aaKnown RBP4.73□□□□□ -1.65
CD46-218ENST00000496723 CHRM2P08172 466 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 CD6P30203 668 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 ZNF134P52741 427 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 UCP3P55916 312 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 ITIH3Q06033 890 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 SRSF4Q08170 494 aaKnown RBP4.73□□□□□ -1.65
CD46-218ENST00000496723 GFOD2Q3B7J2 385 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 LONRF3Q496Y0 759 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 KIAA0895LQ68EN5 471 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 SWSAP1Q6NVH7 229 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 LAYNQ6UX15 382 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 TMEM108Q6UXF1 575 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 MAEAQ7L5Y9 396 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 GRASPQ7Z6J2 395 aaPredicted RBP4.73□□□□□ -1.65
CD46-218ENST00000496723 FMNL3Q8IVF7 1028 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 KIAA0319LQ8IZA0 1049 aa4.73□□□□□ -1.65
CD46-218ENST00000496723 ACTRT3Q9BYD9 372 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms