RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ABCB6Q9NP58 842 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 UBE2TQ9NPD8 197 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-235ENST00000495515 GTF3C4Q9UKN8 822 aa18.23■□□□□ 0.51
HDAC6-235ENST00000495515 CDH23Q9H251 3354 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 MYBPHLA2RUH7 354 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 HCRTO43612 131 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 TBX10O75333 385 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 KCNA5P22460 613 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 RFX1P22670 979 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 HOXA9P31269 272 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 PLD1Q13393 1074 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 PHLDB3Q6NSJ2 640 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 CES5AQ6NT32 575 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 CYP26C1Q6V0L0 522 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 APTXQ7Z2E3 356 aaKnown RBP18.22■□□□□ 0.51
HDAC6-235ENST00000495515 ARHGEF19Q8IW93 802 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 CRYBG2Q8N1P7 616 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 ATAD1Q8NBU5 361 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 RNF214Q8ND24 703 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 CMASQ8NFW8 434 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-235ENST00000495515 SLC7A14Q8TBB6 771 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 PCMTD1Q96MG8 357 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-235ENST00000495515 PKMYT1Q99640 499 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 ARID3AQ99856 593 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 ABI2Q9NYB9 513 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-235ENST00000495515 CLEC1BQ9P126 229 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 CD207Q9UJ71 328 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 DAAM1Q9Y4D1 1078 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 ATP8B3O60423 1300 aa18.22■□□□□ 0.51
HDAC6-235ENST00000495515 ATP2C2O75185 946 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 XYLBO75191 536 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 LRG1P02750 347 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 TPM3P06753 285 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 LTBRP36941 435 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 FANCCQ00597 558 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 CYP27A1Q02318 531 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 ITIH3Q06033 890 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 DUSP4Q13115 394 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 AAK1Q2M2I8 961 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 CFAP221Q4G0U5 840 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 MDH1BQ5I0G3 518 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 ACOT1Q86TX2 421 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 TMEM176AQ96HP8 235 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 ERGIC2Q96RQ1 377 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 LSM14BQ9BX40 385 aaKnown RBP18.21■□□□□ 0.51
HDAC6-235ENST00000495515 DPEP3Q9H4B8 488 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 PLCB1Q9NQ66 1216 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 CRTAC1Q9NQ79 661 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 RTN4Q9NQC3 1192 aaKnown RBP18.21■□□□□ 0.51
HDAC6-235ENST00000495515 NME7Q9Y5B8 376 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 PCDHB4Q9Y5E5 795 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 INSL5Q9Y5Q6 135 aa18.21■□□□□ 0.51
HDAC6-235ENST00000495515 SEC24AO95486 1093 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 DLX2Q07687 328 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-235ENST00000495515 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 SYCP1Q15431 976 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 PUS10Q3MIT2 529 aaKnown RBP18.2■□□□□ 0.5
HDAC6-235ENST00000495515 MGAT5BQ3V5L5 792 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 ZNF394Q53GI3 561 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 SYCE2Q6PIF2 218 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 ELMOD1Q8N336 334 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 MYLPFQ96A32 169 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 PCED1BQ96HM7 432 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 MSLNLQ96KJ4 702 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 HEXIM2Q96MH2 286 aaKnown RBP18.2■□□□□ 0.5
HDAC6-235ENST00000495515 SEPT5Q99719 369 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-235ENST00000495515 PRKD2Q9BZL6 878 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 ELOVL4Q9GZR5 314 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 TMLHEQ9NVH6 421 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 THEGQ9P2T0 379 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 DNAJC12Q9UKB3 198 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 KIAA1257Q9ULG3 409 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 FAM50BQ9Y247 325 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 TSC2P49815 1807 aa18.2■□□□□ 0.5
HDAC6-235ENST00000495515 ATG2AQ2TAZ0 1938 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 A0A1B0GTH6 734 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 CCDC195A0A1B0GUA6 201 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 H3BQ06 376 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-235ENST00000495515 POU2F2P09086 479 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 HAPLN1P10915 354 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-235ENST00000495515 MAGEA11P43364 429 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 EPHB3P54753 998 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 UBASH3AP57075 661 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 RPL10AP62906 217 aaKnown RBP18.19■□□□□ 0.5
HDAC6-235ENST00000495515 RARS2Q5T160 578 aaKnown RBP18.19■□□□□ 0.5
HDAC6-235ENST00000495515 KLHDC7AQ5VTJ3 777 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 TMEM270Q6UE05 265 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 VSTM1Q6UX27 236 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 UBR7Q8N806 425 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 NEK11Q8NG66 645 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 WHAMMQ8TF30 809 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 KAT5Q92993 513 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 RIPOR3Q96MK2 946 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 KREMEN1Q96MU8 473 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 TWNKQ96RR1 684 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 MED10Q9BTT4 135 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 RHOBTB2Q9BYZ6 727 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 ADAM7Q9H2U9 754 aa18.19■□□□□ 0.5
HDAC6-235ENST00000495515 PIDD1Q9HB75 910 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms