RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ATAD1Q8NBU5 361 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 FAM200AQ8TCP9 573 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 NT5C1BQ96P26 610 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 SEPT5Q99719 369 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 APOBEC3GQ9HC16 384 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 HSFX1Q9UBD0 423 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 GTF3C4Q9UKN8 822 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 SLC27A5Q9Y2P5 690 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 INSL5Q9Y5Q6 135 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 HCRTO43612 131 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 ATP2C2O75185 946 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 IL9P15248 144 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 PTPN1P18031 435 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 CD58P19256 250 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 ZNF165P49910 485 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 CDR1P51861 262 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 TWF1Q12792 350 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 TAF12Q16514 161 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 VWA3BQ502W6 1294 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 GBP6Q6ZN66 633 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 LRRTM3Q86VH5 581 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 PPM1KQ8N3J5 372 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 AOPEPQ8N6M6 819 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 B3GALNT2Q8NCR0 500 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 EHBP1Q8NDI1 1231 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 TATDN2Q93075 761 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 ZNF512Q96ME7 567 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 BPIFA3Q9BQP9 254 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 RHOBTB2Q9BYZ6 727 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 FANCLQ9NW38 375 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
CSNK1E-213ENST00000495232 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 A0A0C4DFX4 3053 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 MYBPHLA2RUH7 354 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 LRRN2O75325 713 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 CAVIN2O95810 425 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 BMP1P13497 986 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 PTPN2P17706 415 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 NDST1P52848 882 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 TPM4P67936 248 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 CUL2Q13617 745 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 EXOC3L4Q17RC7 722 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 FAM171BQ6P995 826 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 GRASPQ7Z6J2 395 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 ITIH5Q86UX2 942 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 MYCBPAPQ8TBZ2 947 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 SUSD6Q92537 303 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 MYLPFQ96A32 169 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 MED10Q9BTT4 135 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 NT5C1AQ9BXI3 368 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 INTS2Q9H0H0 1204 aaKnown RBP12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 NDST4Q9H3R1 872 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 FAM124BQ9H5Z6 455 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 TMLHEQ9NVH6 421 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 PRKAG3Q9UGI9 489 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
CSNK1E-213ENST00000495232 GTPBP10A4D1E9 387 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 POU2F2P09086 479 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 HAPLN1P10915 354 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 GRIK1P39086 918 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 INCA1Q0VD86 236 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 PABPC1LQ4VXU2 614 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CDKAL1Q5VV42 579 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 ACSF2Q96CM8 615 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 PCED1BQ96HM7 432 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 FAM81BQ96LP2 452 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CORO1BQ9BR76 489 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CRACR2AQ9BSW2 395 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 VPS16Q9H269 839 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 POMKQ9H5K3 350 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 WDR6Q9NNW5 1121 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CRTAC1Q9NQ79 661 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CISHQ9NSE2 258 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 ASB3Q9Y575 518 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 TCF20Q9UGU0 1960 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CLUHO75153 1309 aa12.87□□□□□ -0.35
CSNK1E-213ENST00000495232 CILPO75339 1184 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 SOAT2O75908 522 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 PAPLNO95428 1278 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 VNN2O95498 520 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 BDNFP23560 247 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 CYP2F1P24903 491 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 ANXA13P27216 316 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 ORC1Q13415 861 aa12.86□□□□□ -0.35
CSNK1E-213ENST00000495232 KRT31Q15323 416 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms