RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 MECRQ9BV79 373 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 MAGEB5Q9BZ81 275 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 EPB41L4BQ9H329 900 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 A0A087WZ62 844 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 KLRG2A4D1S0 409 aaPredicted RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 HCRTO43612 131 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 LGR5O75473 907 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 RGS20O76081 388 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 CYP1A2P05177 515 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 ATP2A2P16615 1042 aaKnown RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 EPHB2P29323 1055 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 MMP13P45452 471 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 FNTAP49354 379 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 GTF2A2P52657 109 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 SPOCD1Q6ZMY3 1216 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 LONP2Q86WA8 852 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 CFAP61Q8NHU2 1237 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 APOL2Q9BQE5 337 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 FDXACB1Q9BRP7 624 aaPredicted RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 MRPL4Q9BYD3 311 aaKnown RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 B3GNT5Q9BYG0 378 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 CXorf56Q9H5V9 222 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 TXNDC16Q9P2K2 825 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 PCYOX1Q9UHG3 505 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 ARL2BPQ9Y2Y0 163 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 TCRBV7S3A2A0A539 114 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 EME2A4GXA9 379 aaPredicted RBP14.12□□□□□ -0.15
GPC1-209ENST00000495100 BTNL10A8MVZ5 291 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 VNN1O95497 513 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 CYP2C8P10632 490 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 RFX1P22670 979 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 FOXN2P32314 431 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 BAG6P46379 1132 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 NOMO3P69849 1222 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 NME3Q13232 169 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 ZACNQ401N2 412 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 UNC45BQ8IWX7 931 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 KIAA1683Q9H0B3 1180 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 ZNF395Q9H8N7 513 aaPredicted RBP14.12□□□□□ -0.15
GPC1-209ENST00000495100 FBXO6Q9NRD1 293 aaPredicted RBP14.12□□□□□ -0.15
GPC1-209ENST00000495100 HOXC10Q9NYD6 342 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 ZFP69BQ9UJL9 534 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 AFG3L2Q9Y4W6 797 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 LPXNO60711 386 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 EDN1P05305 212 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 NFICP08651 508 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 FDX1P10109 184 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 RAD23BP54727 409 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 OGDHQ02218 1023 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 SLC1A5Q15758 541 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 YIPF3Q9GZM5 350 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 PCMTD2Q9NV79 361 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 SLC17A7Q9P2U7 560 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 CACNG4Q9UBN1 327 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 COL16A1Q07092 1604 aaPredicted RBP14.12□□□□□ -0.15
GPC1-209ENST00000495100 GOLGA8TH3BQL2 631 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 ATP6V1G2O95670 118 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 GMPRP36959 345 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 EPHB1P54762 984 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 LAMTOR4Q0VGL1 99 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 MUM1Q2TAK8 710 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 PAN2Q504Q3 1202 aaKnown RBP14.12□□□□□ -0.15
GPC1-209ENST00000495100 ATF7IP2Q5U623 682 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 FAM160B1Q5W0V3 765 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 EP400NLQ6ZTU2 488 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 TAS1R3Q7RTX0 852 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 SLC9A9Q8IVB4 645 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 ARMC2Q8NEN0 867 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 ADAM32Q8TC27 787 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 TCP10LQ8TDR4 215 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
GPC1-209ENST00000495100 RBM41Q96IZ5 413 aaKnown RBP14.12□□□□□ -0.15
GPC1-209ENST00000495100 ACAP3Q96P50 834 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 NUDCD1Q96RS6 583 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 HAPLN2Q9GZV7 340 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 MYLK2Q9H1R3 596 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 AAASQ9NRG9 546 aa14.12□□□□□ -0.15
GPC1-209ENST00000495100 LOC100653049A0A140TA62 436 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 TXNDC9O14530 226 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 USP12O75317 370 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 ENTPD5O75356 428 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 KRT34O76011 436 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 FSBPO95073 299 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 TOP3BO95985 862 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 ENO1P06733 434 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 TROVE2P10155 538 aaKnown RBP eCLIP14.11□□□□□ -0.15
GPC1-209ENST00000495100 ATXN1P54253 815 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 ALDH18A1P54886 795 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 NCKAP1LP55160 1127 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 SLFN12LQ6IEE8 588 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 PDCD7Q8N8D1 485 aaKnown RBP14.11□□□□□ -0.15
GPC1-209ENST00000495100 CCT6BQ92526 530 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 PGM2Q96G03 612 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 TTC1Q99614 292 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 MYPNQ86TC9 1320 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 ENO4A6NNW6 628 aa14.11□□□□□ -0.15
GPC1-209ENST00000495100 KCNA2P16389 499 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms