RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 AVENQ9NQS1 362 aaPredicted RBP11.7□□□□□ -0.54
PKP4-215ENST00000494945 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 ADAM28Q9UKQ2 775 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 PAXBP1Q9Y5B6 917 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 DENND4CQ5VZ89 1909 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 M0QYV0 167 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 NRP1O14786 923 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 TADA2AO75478 443 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 MTA2O94776 668 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 CYP1A2P05177 515 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 ITGB1P05556 798 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 CALB1P05937 261 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 ACRP10323 421 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 MMP8P22894 467 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 LMO2P25791 158 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 ELAVL2Q12926 359 aaKnown RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 PAN2Q504Q3 1202 aaKnown RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 LIN9Q5TKA1 542 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 DENND1BQ6P3S1 775 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 PSRC1Q6PGN9 363 aaPredicted RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 SYT10Q6XYQ8 523 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 DNAAF5Q86Y56 855 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 CMTR2Q8IYT2 770 aaKnown RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 MCOLN2Q8IZK6 566 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 THEM5Q8N1Q8 247 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 SLC35F6Q8N357 371 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 C12orf29Q8N999 325 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 C1orf131Q8NDD1 294 aaKnown RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 HASPINQ8TF76 798 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 BADQ92934 168 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 ZNF653Q96CK0 615 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 ZNF689Q96CS4 500 aaPredicted RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 ARHGEF26Q96DR7 871 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 SYT15Q9BQS2 421 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 ACBD6Q9BR61 282 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 RC3H2Q9HBD1 1191 aaKnown RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 ADAM22Q9P0K1 906 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 UVRAGQ9P2Y5 699 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 HESX1Q9UBX0 185 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 SALL4Q9UJQ4 1053 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 TSPAN16Q9UKR8 245 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 CDH9Q9ULB4 789 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 FAN1Q9Y2M0 1017 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 PRG3Q9Y2Y8 225 aaPredicted RBP11.69□□□□□ -0.54
PKP4-215ENST00000494945 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
PKP4-215ENST00000494945 SF3B1O75533 1304 aaKnown RBP eCLIP11.68□□□□□ -0.54
PKP4-215ENST00000494945 I3L4J1 428 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 SYN3O14994 580 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 MOCS3O95396 460 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 FGBP02675 491 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 GALTP07902 379 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 PTPN1P18031 435 aaKnown RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 CASQ1P31415 396 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 GPD2P43304 727 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 SLC11A1P49279 550 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 NAP1L1P55209 391 aaKnown RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 DEFB103AP81534 67 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 PTP4A2Q12974 167 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 GOLGA7BQ2TAP0 167 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 PPP1R26Q5T8A7 1209 aaPredicted RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 OVOS1Q6IE37 1185 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 ERICH1Q86X53 443 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 WDTC1Q8N5D0 677 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 SLC35G2Q8TBE7 412 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 WDR24Q96S15 920 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 HNRNPABQ99729 332 aaKnown RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 C11orf70Q9BRQ4 267 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 MIS12Q9H081 205 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 CWH43Q9H720 699 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 FAM49BQ9NUQ9 324 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 MARCH5Q9NX47 278 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 CNOT8Q9UFF9 292 aaKnown RBP11.68□□□□□ -0.54
PKP4-215ENST00000494945 STRIP2Q9ULQ0 834 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 CAPN6Q9Y6Q1 641 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 SCINQ9Y6U3 715 aa11.68□□□□□ -0.54
PKP4-215ENST00000494945 CTAGE9A4FU28 777 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 F8W810 466 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 HCRTO43612 131 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 BUB1O43683 1085 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 OAZ2O95190 189 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 ACAT1P24752 427 aaKnown RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 ALDH7A1P49419 539 aaKnown RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 BCAT1P54687 386 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 GSCP56915 257 aaPredicted RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 BCAR1P56945 870 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 SNX16P57768 344 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 YWHAHQ04917 246 aaPredicted RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 BST2Q10589 180 aaKnown RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
PKP4-215ENST00000494945 MMS22LQ6ZRQ5 1243 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 ZNF365Q70YC5 407 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 C16orf59Q7L2K0 433 aa11.67□□□□□ -0.54
PKP4-215ENST00000494945 OTOP2Q7RTS6 562 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms