RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
BRD3-206ENST00000494743 MRPL58Q14197 206 aaKnown RBP12.86□□□□□ -0.35
BRD3-206ENST00000494743 ACOT1Q86TX2 421 aa12.86□□□□□ -0.35
BRD3-206ENST00000494743 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
BRD3-206ENST00000494743 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
BRD3-206ENST00000494743 COLGALT1Q8NBJ5 622 aa12.86□□□□□ -0.35
BRD3-206ENST00000494743 ZNF558Q96NG5 402 aa12.86□□□□□ -0.35
BRD3-206ENST00000494743 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRD3-206ENST00000494743 PPP2R2CQ9Y2T4 447 aa12.86□□□□□ -0.35
BRD3-206ENST00000494743 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
BRD3-206ENST00000494743 LCHNA4D1U4 455 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 MED7O43513 233 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 PDGFRBP09619 1106 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 UNGP13051 313 aaPredicted RBP12.85□□□□□ -0.35
BRD3-206ENST00000494743 CD19P15391 556 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 TNFAIP3P21580 790 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
BRD3-206ENST00000494743 PCSK1P29120 753 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 NOMO3P69849 1222 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 YWHAHQ04917 246 aaPredicted RBP12.85□□□□□ -0.35
BRD3-206ENST00000494743 SHHQ15465 462 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 CNGA2Q16280 664 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 CLEC16AQ2KHT3 1053 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 SGO2Q562F6 1265 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 ARHGAP17Q68EM7 881 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 OVOS1Q6IE37 1185 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 ALKBH5Q6P6C2 394 aaKnown RBP12.85□□□□□ -0.35
BRD3-206ENST00000494743 LCLAT1Q6UWP7 414 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.85□□□□□ -0.35
BRD3-206ENST00000494743 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 METTL23Q86XA0 190 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 FIBCD1Q8N539 461 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 B3GALNT2Q8NCR0 500 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 OR10T2Q8NGX3 314 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 TNIP3Q96KP6 325 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 HEXIM2Q96MH2 286 aaKnown RBP12.85□□□□□ -0.35
BRD3-206ENST00000494743 PKMYT1Q99640 499 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 SYT15Q9BQS2 421 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 ACBD6Q9BR61 282 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.85□□□□□ -0.35
BRD3-206ENST00000494743 TAS2R14Q9NYV8 317 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
BRD3-206ENST00000494743 CDH9Q9ULB4 789 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 CDH23Q9H251 3354 aa12.85□□□□□ -0.35
BRD3-206ENST00000494743 TLL1O43897 1013 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 TBC1D4O60343 1298 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 ATP2C2O75185 946 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 MICAL2O94851 1124 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 IPO7O95373 1038 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 LSM8O95777 96 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 CCDC175P0C221 793 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 GZMAP12544 262 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 PTPN1P18031 435 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 CDH5P33151 784 aaPredicted RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 PPM1AP35813 382 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 KRT83P78385 493 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 CENPCQ03188 943 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 STILQ15468 1287 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 SPA17Q15506 151 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 PKDCCQ504Y2 493 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 INTS6LQ5JSJ4 861 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 RTP2Q5QGT7 225 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 PPP1R26Q5T8A7 1209 aaPredicted RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 FAM171A1Q5VUB5 890 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 DENND1BQ6P3S1 775 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 FAM171BQ6P995 826 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 TAS1R1Q7RTX1 841 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 CYFIP2Q96F07 1278 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 RNPC3Q96LT9 517 aaKnown RBP12.84□□□□□ -0.35
BRD3-206ENST00000494743 ISCUQ9H1K1 167 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 LHX5Q9H2C1 402 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 SPG21Q9NZD8 308 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 TSPAN16Q9UKR8 245 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 PCDHA13Q9Y5I0 950 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 TRANK1O15050 2925 aa12.84□□□□□ -0.35
BRD3-206ENST00000494743 PIEZO1Q92508 2521 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 A0A0U1RQJ8 604 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 RCCD1A6NED2 376 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 USP27XA6NNY8 438 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 SOD2P04179 222 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 CCDC130P13994 396 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
BRD3-206ENST00000494743 VAV2P52735 878 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 C10orf76Q5T2E6 689 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 ZNF662Q6ZS27 426 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 PAQR9Q6ZVX9 377 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 TTC30AQ86WT1 665 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 PASD1Q8IV76 773 aa12.83□□□□□ -0.36
BRD3-206ENST00000494743 REXO1L1PQ8IX06 675 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms