RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 PDCLQ13371 301 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 LLGL1Q15334 1064 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 TERF2Q15554 542 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 LRRC38Q5VT99 294 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 CCDC137Q6PK04 289 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 LCLAT1Q6UWP7 414 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 ZDHHC24Q6UX98 284 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 LIMS2Q7Z4I7 341 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 BEST2Q8NFU1 509 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 EXD1Q8NHP7 514 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 JOSD2Q8TAC2 188 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SLCO2A1Q92959 643 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 APOL6Q9BWW8 343 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 DPH5Q9H2P9 285 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 FAM114A2Q9NRY5 505 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 GRHL1Q9NZI5 618 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 MTUS1Q9ULD2 1270 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 STRIP2Q9ULQ0 834 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 UBQLN1Q9UMX0 589 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 USTQ9Y2C2 406 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 IPPQ9Y573 584 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 BRCA2P51587 3418 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SPTLC1O15269 473 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 RALAP11233 206 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 GYS2P54840 703 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 DRG2P55039 364 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 HLTFQ14527 1009 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 UAP1Q16222 522 aaPredicted RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 ATP13A4Q4VNC1 1196 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 PKDCCQ504Y2 493 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SGO2Q562F6 1265 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 ALS2CLQ60I27 953 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 TXNRD3NBQ6F5E7 133 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 ARFGAP1Q8N6T3 406 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 C12orf29Q8N999 325 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SMC1BQ8NDV3 1235 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 FNIP1Q8TF40 1166 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 KBTBD7Q8WVZ9 684 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 ZIM3Q96PE6 472 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 PLVAPQ9BX97 442 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 NT5C1AQ9BXI3 368 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 TXLNGYQ9BZA5 131 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 TRIM6Q9C030 488 aaPredicted RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 RAB17Q9H0T7 212 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 PRDM10Q9NQV6 1147 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 KLK14Q9P0G3 267 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 LCMT1Q9UIC8 334 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 KIAA1257Q9ULG3 409 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 R3HDM2Q9Y2K5 976 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 UTP11Q9Y3A2 253 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 SNX9Q9Y5X1 595 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 CDY2AQ9Y6F7 541 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 TSC2P49815 1807 aa11.23□□□□□ -0.61
PRPF4B-209ENST00000494674 GRIN2DO15399 1336 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 PTGESO14684 152 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 AOC2O75106 756 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 ALDH1A1P00352 501 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 CHRNA1P02708 482 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 CCND3P30281 292 aaPredicted RBP11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 RPL21P46778 160 aaKnown RBP11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 KCNJ1P48048 391 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 PSMC1P62191 440 aaKnown RBP11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 MGAT3Q09327 533 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 PIGHQ14442 188 aaPredicted RBP11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 SOWAHAQ2M3V2 549 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 SESTD1Q86VW0 696 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 KLHDC9Q8NEP7 349 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 UBA3Q8TBC4 463 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 C1orf54Q8WWF1 131 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 ATG4AQ8WYN0 398 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 TRIM31Q9BZY9 425 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 DCLK3Q9C098 648 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 CHST7Q9NS84 486 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 KLHL11Q9NVR0 708 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 TSPAN16Q9UKR8 245 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 TRPV2Q9Y5S1 764 aa11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 TDRD15B5MCY1 1934 aaKnown RBP11.22□□□□□ -0.61
PRPF4B-209ENST00000494674 TP73O15350 636 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 HCRTO43612 131 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 RNF40O75150 1001 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 CD4P01730 458 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 RARBP10826 455 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 FGFR1P11362 822 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 KRT3P12035 628 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 SLC25A11Q02978 314 aaKnown RBP11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 ADCY2Q08462 1091 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 GOLGA7BQ2TAP0 167 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 TRNP1Q6NT89 227 aa11.21□□□□□ -0.61
PRPF4B-209ENST00000494674 TMC3Q7Z5M5 1100 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms