RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 C2CD2Q9Y426 696 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 SLC26A4O43511 780 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 HUS1O60921 280 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 RNF40O75150 1001 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 IL18RAPO95256 599 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 GCNT3O95395 438 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 ITGB3P05106 788 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 CYP11A1P05108 521 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 CKMP06732 381 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 ADRB1P08588 477 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 IDEP14735 1019 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 ARSAP15289 507 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 GBP1P32455 592 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 DDIT3P35638 169 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 LONP1P36776 959 aaKnown RBP10.37□□□□□ -0.75
UBR4-216ENST00000494503 TXLNAP40222 546 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 IFNAR2P48551 515 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 ZNF131P52739 623 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 NLRP12P59046 1061 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 GTF2BQ00403 316 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 MYL7Q01449 175 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 SMARCB1Q12824 385 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
UBR4-216ENST00000494503 DDR2Q16832 855 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 ST3GAL2Q16842 350 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 WDR44Q5JSH3 913 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 PKN3Q6P5Z2 889 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 CACNA2D4Q7Z3S7 1137 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 LRRTM3Q86VH5 581 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 WDR5BQ86VZ2 330 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 TTC30AQ86WT1 665 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 EFCAB13Q8IY85 973 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 SYNPOQ8N3V7 929 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 CPA6Q8N4T0 437 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 LRRC15Q8TF66 581 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 USP13Q92995 863 aaPredicted RBP10.37□□□□□ -0.75
UBR4-216ENST00000494503 EXOC4Q96A65 974 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 SMOC1Q9H4F8 434 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 IL21Q9HBE4 155 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 TDP1Q9NUW8 608 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 POLR3BQ9NW08 1133 aaPredicted RBP10.37□□□□□ -0.75
UBR4-216ENST00000494503 DDX43Q9NXZ2 648 aaKnown RBP10.37□□□□□ -0.75
UBR4-216ENST00000494503 RBAKQ9NYW8 714 aaPredicted RBP10.37□□□□□ -0.75
UBR4-216ENST00000494503 HSFX1Q9UBD0 423 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 CCDC39Q9UFE4 941 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 EXOC7Q9UPT5 735 aa10.37□□□□□ -0.75
UBR4-216ENST00000494503 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.37□□□□□ -0.75
UBR4-216ENST00000494503 EML5Q05BV3 1969 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 TRAV19A0A0A6YYK7 116 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 ANO9A1A5B4 782 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 GOLGA8IPA6NC78 632 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 GOLGA8JA6NMD2 632 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 FOXD2O60548 495 aaPredicted RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 PAPSS2O95340 614 aaPredicted RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 EGFP01133 1207 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 TMEM191BP0C7N4 346 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 CSH1P0DML2 217 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 CSH2P0DML3 217 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 DDX6P26196 483 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBR4-216ENST00000494503 PNPLA4P41247 253 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 RPL10AP62906 217 aaKnown RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 CEBPZQ03701 1054 aaKnown RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 KCNB1Q14721 858 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 POSTNQ15063 836 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 NFE2Q16621 373 aaPredicted RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 FSTL4Q6MZW2 842 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 KBTBD6Q86V97 674 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 SPATA2LQ8IUW3 424 aaPredicted RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 PDCL2Q8N4E4 241 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 CSGALNACT2Q8N6G5 542 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 RPLP0P6Q8NHW5 317 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 CACTINQ8WUQ7 758 aaKnown RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 GAB3Q8WWW8 586 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 DDX1Q92499 740 aaKnown RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 EPSTI1Q96J88 318 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 FAM84AQ96KN4 292 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 ACCSQ96QU6 501 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 P2RY13Q9BPV8 354 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 KIF9Q9HAQ2 790 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 HPS4Q9NQG7 708 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 TMLHEQ9NVH6 421 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 DUS2Q9NX74 493 aaKnown RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 UXTQ9UBK9 157 aaPredicted RBP10.36□□□□□ -0.75
UBR4-216ENST00000494503 ZMYM5Q9UJ78 669 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 SNX9Q9Y5X1 595 aa10.36□□□□□ -0.75
UBR4-216ENST00000494503 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
UBR4-216ENST00000494503 ADRB2P07550 413 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 CYP2F1P24903 491 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 MPLP40238 635 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 SEC13P55735 322 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 CREB5Q02930 508 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 MTF1Q14872 753 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 PDGFRLQ15198 375 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 ELF2Q15723 593 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 C8orf34Q49A92 452 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 TMEM196Q5HYL7 178 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 RRAGBQ5VZM2 374 aa10.35□□□□□ -0.75
UBR4-216ENST00000494503 BRAPQ7Z569 592 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms