RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CYP4F8P98187 520 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 BFSP1Q12934 665 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 CUL4BQ13620 913 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 ARID3BQ8IVW6 561 aaPredicted RBP14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 TMEM86AQ8N2M4 240 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 LRRC52Q8N7C0 313 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 ZNF507Q8TCN5 953 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 GIPC2Q8TF65 315 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 SCFD1Q8WVM8 642 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 SECISBP2LQ93073 1101 aaKnown RBP14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 TASP1Q9H6P5 420 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 C8orf33Q9H7E9 229 aaPredicted RBP14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 OBP2AQ9NY56 170 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 FAM13BQ9NYF5 915 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 HSPBP1Q9NZL4 362 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 NME7Q9Y5B8 376 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 PTPRDP23468 1912 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 GREB1Q4ZG55 1949 aa14.4□□□□□ -0.1
CTDSP1-212ENST00000494067 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 PRAMEF12O95522 483 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 TNNC2P02585 160 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 HMGA1P17096 107 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 NRLP54845 237 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 RPL10AP62906 217 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 ARHGAP29Q52LW3 1261 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 FAM26FQ5R3K3 315 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 NELFCDQ8IXH7 590 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 RIN3Q8TB24 985 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 SPATA18Q8TC71 538 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 FAM126AQ9BYI3 521 aaPredicted RBP14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 SMG9Q9H0W8 520 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 LMAN1LQ9HAT1 526 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 MAGEF1Q9HAY2 307 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 INTS13Q9NVM9 706 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 DDX43Q9NXZ2 648 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 PCDHGA2Q9Y5H1 932 aa14.39□□□□□ -0.11
CTDSP1-212ENST00000494067 CACNA1IQ9P0X4 2223 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 CLIC2O15247 247 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 EIF3DO15371 548 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 ACTN4O43707 911 aaKnown RBP14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 KLRC4O43908 158 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 TADA3O75528 432 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 CSH1P0DML2 217 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 CSH2P0DML3 217 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 CCNE1P24864 410 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 DDX6P26196 483 aaKnown RBP eCLIP14.38□□□□□ -0.115e-6■■■■■ 34.8
CTDSP1-212ENST00000494067 PCSK1P29120 753 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 AVPR1AP37288 418 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 AFMP43652 599 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 SOX9P48436 509 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 LHX1P48742 406 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 PLCB2Q00722 1185 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 LRRC32Q14392 662 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 UNC13DQ70J99 1090 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 LIMS2Q7Z4I7 341 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 PLEKHO2Q8TD55 490 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 BPIFB1Q8TDL5 484 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 KBTBD7Q8WVZ9 684 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 RUBCNQ92622 972 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 ZFYVE19Q96K21 471 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 PI4K2AQ9BTU6 479 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 ZSCAN32Q9NX65 697 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 GDAP2Q9NXN4 497 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 UXTQ9UBK9 157 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 SERTAD1Q9UHV2 236 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 RCOR1Q9UKL0 485 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 CFAP45Q9UL16 551 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 SNX9Q9Y5X1 595 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 ANAPC1Q9H1A4 1944 aa14.38□□□□□ -0.11
CTDSP1-212ENST00000494067 GABRDO14764 452 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 ATP2C2O75185 946 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 WEE1P30291 646 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 ME1P48163 572 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 CCR3P51677 355 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 FCHO2Q0JRZ9 810 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 DUOXA2Q1HG44 320 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 ATL3Q6DD88 541 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 DPH6Q7L8W6 267 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 SPATA2LQ8IUW3 424 aaPredicted RBP14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 TOP6BLQ8N6T0 577 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 CELF5Q8N6W0 485 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 RDH13Q8NBN7 331 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 LEO1Q8WVC0 666 aaPredicted RBP14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 ZNF516Q92618 1163 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 MRPS31Q92665 395 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 CHRDQ9H2X0 955 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 ABCB6Q9NP58 842 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 SLC39A2Q9NP94 309 aa14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 MAGED2Q9UNF1 606 aaPredicted RBP14.37□□□□□ -0.11
CTDSP1-212ENST00000494067 DCHS1Q96JQ0 3298 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 MYBPHLA2RUH7 354 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 SOBPA7XYQ1 873 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 CST3P01034 146 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 F11P03951 625 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms