RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RRAGAQ7L523 313 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 NLRP14Q86W24 1093 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 KIAA0895Q8NCT3 520 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 MYCBPAPQ8TBZ2 947 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 CLDN23Q96B33 292 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 IGSF21Q96ID5 467 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC43Q96MW1 224 aaKnown RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 KLHL5Q96PQ7 755 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 TMEM60Q9H2L4 133 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 AZI2Q9H6S1 392 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 FAM114A2Q9NRY5 505 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 RBM12Q9NTZ6 932 aaKnown RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 STK39Q9UEW8 545 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 SEC63Q9UGP8 760 aaKnown RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 TTC7AQ9ULT0 858 aaPredicted RBP11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 MAPK8IP1Q9UQF2 711 aa11.33□□□□□ -0.6
PDLIM1-205ENST00000493949 WDFY3Q8IZQ1 3526 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 F5P12259 2224 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 SPAG17Q6Q759 2223 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 COL1A2P08123 1366 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 A0A0U1RQF3 1178 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 GPR32O75388 356 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 RETP07949 1114 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 GSTA1P08263 222 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 USP11P51784 963 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 UBE2SQ16763 222 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 INF2Q27J81 1249 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 TMEM119Q4V9L6 283 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 HGSNATQ68CP4 663 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 C6orf89Q6UWU4 347 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC121Q6ZUS5 278 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 MAATS1Q7Z4T9 603 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 VPS36Q86VN1 386 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 REXO1Q8N1G1 1221 aaKnown RBP11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC26Q8TAB7 109 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 SEC14L1Q92503 715 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 NAP1L3Q99457 506 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 OSMRQ99650 979 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 VN1R3Q9BXE9 311 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 MMRN2Q9H8L6 949 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 ZMIZ1Q9ULJ6 1067 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC195A0A1B0GUA6 201 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 ZNF233A6NK53 670 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 PGRMC1O00264 195 aaKnown RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 TM4SF5O14894 197 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 SART1O43290 800 aaKnown RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 HBP1O60381 514 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 TDGF1P13385 188 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 KLRC2P26717 231 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 PRKCIP41743 596 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 RPS9P46781 194 aaKnown RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 STAT5BP51692 787 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 NAPAP54920 295 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 MTMR1Q13613 665 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 CSRP2Q16527 193 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 KIZQ2M2Z5 673 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 TDRD12Q587J7 1177 aaKnown RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 KRT79Q5XKE5 535 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 PRR23CQ6ZRP0 262 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 HOOK3Q86VS8 718 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 GSPT2Q8IYD1 628 aaKnown RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 CELF5Q8N6W0 485 aaKnown RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 HELQQ8TDG4 1101 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 BCL7CQ8WUZ0 217 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 RAD54LQ92698 747 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 ARL8AQ96BM9 186 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 DRC1Q96MC2 740 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 MTMR9Q96QG7 549 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 STMN4Q9H169 189 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 EPB41L5Q9HCM4 733 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 JPH1Q9HDC5 661 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 SEMA4GQ9NTN9 838 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 SLC9A2Q9UBY0 812 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 MTF2Q9Y483 593 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 NUMBLQ9Y6R0 609 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 CAPN7Q9Y6W3 813 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
PDLIM1-205ENST00000493949 IGSF10Q6WRI0 2623 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 IGKV6D-21A0A0A0MT36 114 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 GMNCA6NCL1 334 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 FAM170BA6NMN3 283 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 TRAPPC3O43617 180 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms