RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 NTHL1P78549 312 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 LRRC63Q05C16 580 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 TWF1Q12792 350 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 GPR17Q13304 367 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 NCOA4Q13772 614 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 SOWAHAQ2M3V2 549 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 ZNF667Q5HYK9 610 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 SCARA5Q6ZMJ2 495 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 SV2AQ7L0J3 742 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 TCEAL8Q8IYN2 117 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 TOP6BLQ8N6T0 577 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 SUMF1Q8NBK3 374 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 OR6B3Q8NGW1 331 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 TMEM174Q8WUU8 243 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 ELMO3Q96BJ8 720 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 SEPT5Q99719 369 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 CORO1BQ9BR76 489 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 ZCWPW1Q9H0M4 648 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 WDR6Q9NNW5 1121 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 HCFC1R1Q9NWW0 138 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 ABI2Q9NYB9 513 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 YIPF1Q9Y548 306 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 KMT2BQ9UMN6 2715 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 C2orf16Q68DN1 1984 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 ACACBO00763 2458 aa11.15□□□□□ -0.62
TRAPPC12-222ENST00000493792 SPTBN2O15020 2390 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 BICDL2A1A5D9 508 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 HCRTO43612 131 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 STX10O60499 249 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 SOAT2O75908 522 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 VNN1O95497 513 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 C4BPAP04003 597 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 PDGFRBP09619 1106 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 P4HA1P13674 534 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 BMP6P22004 513 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 PCSK1P29120 753 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 ALDH1A3P47895 512 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 LHX1P48742 406 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 EPHB3P54753 998 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 PAK1Q13153 545 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 TAF12Q16514 161 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 MGAT5BQ3V5L5 792 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 PABPC1LQ4VXU2 614 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 IQCEQ6IPM2 695 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 DPH6Q7L8W6 267 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 OSTM1Q86WC4 334 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 CREBRFQ8IUR6 639 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 TTC9BQ8N6N2 239 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 TRIML1Q8N9V2 468 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 ING5Q8WYH8 240 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 RUBCNQ92622 972 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 ZNF512Q96ME7 567 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 IMPG2Q9BZV3 1241 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 MAFFQ9ULX9 164 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
TRAPPC12-222ENST00000493792 CFAP47Q6ZTR5 3102 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 IKBKBO14920 756 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 SLC16A3O15427 465 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 HLA-DRAP01903 254 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 RHOP08100 348 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 SP9P0CG40 484 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 MYL4P12829 197 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 PTPN2P17706 415 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 GNL1P36915 607 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 PSMC1P62191 440 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 CLDN10P78369 228 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 PPP3CAQ08209 521 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 PLD1Q13393 1074 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 TPD52L1Q16890 204 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 SGSM1Q2NKQ1 1148 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 ZACNQ401N2 412 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 INTS6LQ5JSJ4 861 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 CYP4A22Q5TCH4 519 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 RTL10Q7L3V2 364 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 LRRTM3Q86VH5 581 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 MAML2Q8IZL2 1156 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 SLC44A3Q8N4M1 653 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 SYT15Q9BQS2 421 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 ACBD6Q9BR61 282 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 MRPL45Q9BRJ2 306 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 PI4K2AQ9BTU6 479 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 SMYD3Q9H7B4 428 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 IGSF9Q9P2J2 1179 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 EPS15L1Q9UBC2 864 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 DNMT3BQ9UBC3 853 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 ARMCX3Q9UH62 379 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 GTF3C4Q9UKN8 822 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 FBXL21Q9UKT6 434 aa11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-222ENST00000493792 PCDHB5Q9Y5E4 795 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms