RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 RARBP10826 455 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 EDNRBP24530 442 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 PIK3CGP48736 1102 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 ABCB5Q2M3G0 1257 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 RUSC1-AS1Q66K80 236 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 KRT26Q7Z3Y9 468 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 TTYH3Q9C0H2 523 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 TINAGL1Q9GZM7 467 aaPredicted RBP5.49□□□□□ -1.53
SMC4-223ENST00000493695 RLIMQ9NVW2 624 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 SIDT1Q9NXL6 827 aaKnown RBP5.49□□□□□ -1.53
SMC4-223ENST00000493695 DLL3Q9NYJ7 618 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 SERTAD3Q9UJW9 196 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 CADPSQ9ULU8 1353 aa5.49□□□□□ -1.53
SMC4-223ENST00000493695 LOC105371045A0A1W2PR82 267 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 H3BNC9 293 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 K7ESF4 209 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 ZNF213O14771 459 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 PCSK6P29122 969 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 SDE2Q6IQ49 451 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 CATSPERGQ6ZRH7 1159 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 MAVSQ7Z434 540 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 USP37Q86T82 979 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 PNMA8AQ86V59 439 aaPredicted RBP5.48□□□□□ -1.53
SMC4-223ENST00000493695 CHSY1Q86X52 802 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.48□□□□□ -1.53
SMC4-223ENST00000493695 NANOGP1Q8N7R0 232 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 PCSK9Q8NBP7 692 aaKnown RBP5.48□□□□□ -1.53
SMC4-223ENST00000493695 XAGE5Q8WWM1 108 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 COA7Q96BR5 231 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 ASB2Q96Q27 587 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 DMRTA2Q96SC8 542 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 MACROD1Q9BQ69 325 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 FAM126AQ9BYI3 521 aaPredicted RBP5.48□□□□□ -1.53
SMC4-223ENST00000493695 PRSS22Q9GZN4 317 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 PUS7LQ9H0K6 701 aaKnown RBP5.48□□□□□ -1.53
SMC4-223ENST00000493695 TRNAU1APQ9NX07 287 aaKnown RBP5.48□□□□□ -1.53
SMC4-223ENST00000493695 PCDHA3Q9Y5H8 950 aa5.48□□□□□ -1.53
SMC4-223ENST00000493695 CFAP20Q9Y6A4 193 aaKnown RBP5.48□□□□□ -1.53
SMC4-223ENST00000493695 MYMKA6NI61 221 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 SLC16A3O15427 465 aaKnown RBP5.47□□□□□ -1.53
SMC4-223ENST00000493695 TLR5O60602 858 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 FESP07332 822 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 NPSP0C0P6 89 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 LIPAP38571 399 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 CYP4F2P78329 520 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 KLHL22Q53GT1 634 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 ICE2Q659A1 982 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 ZNF517Q6ZMY9 492 aaPredicted RBP5.47□□□□□ -1.53
SMC4-223ENST00000493695 WDR53Q7Z5U6 358 aaPredicted RBP5.47□□□□□ -1.53
SMC4-223ENST00000493695 CPA6Q8N4T0 437 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 C3orf20Q8ND61 904 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 FAM46DQ8NEK8 389 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 CYP2W1Q8TAV3 490 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 NSUN6Q8TEA1 469 aaKnown RBP5.47□□□□□ -1.53
SMC4-223ENST00000493695 TEKT5Q96M29 485 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 PUS7Q96PZ0 661 aaKnown RBP5.47□□□□□ -1.53
SMC4-223ENST00000493695 NELL2Q99435 816 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 GPR35Q9HC97 309 aa5.47□□□□□ -1.53
SMC4-223ENST00000493695 PHLDB1Q86UU1 1377 aa5.46□□□□□ -1.54
SMC4-223ENST00000493695 IL6RP08887 468 aaPredicted RBP5.46□□□□□ -1.54
SMC4-223ENST00000493695 SFPQP23246 707 aaKnown RBP eCLIP5.46□□□□□ -1.54
SMC4-223ENST00000493695 NR4A2P43354 598 aa5.46□□□□□ -1.54
SMC4-223ENST00000493695 HOXA4Q00056 320 aaPredicted RBP5.46□□□□□ -1.54
SMC4-223ENST00000493695 TRIP6Q15654 476 aaKnown RBP5.46□□□□□ -1.54
SMC4-223ENST00000493695 CERKLQ49MI3 558 aaPredicted RBP5.46□□□□□ -1.54
SMC4-223ENST00000493695 SFRP4Q6FHJ7 346 aaPredicted RBP5.46□□□□□ -1.54
SMC4-223ENST00000493695 SERPINA13PQ6UXR4 307 aa5.46□□□□□ -1.54
SMC4-223ENST00000493695 DUSP22Q9NRW4 184 aa5.46□□□□□ -1.54
SMC4-223ENST00000493695 KLHL13Q9P2N7 655 aa5.46□□□□□ -1.54
SMC4-223ENST00000493695 ABCF2Q9UG63 623 aa5.46□□□□□ -1.54
SMC4-223ENST00000493695 EXOC3O60645 756 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 ONECUT2O95948 504 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 FOXG1P55316 489 aaPredicted RBP5.45□□□□□ -1.54
SMC4-223ENST00000493695 ITKQ08881 620 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 ARHGAP40Q5TG30 622 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 EFCAB2Q5VUJ9 269 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 TRIM72Q6ZMU5 477 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 DTX2Q86UW9 622 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 GALNT16Q8N428 558 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 DAZAP1Q96EP5 407 aaKnown RBP5.45□□□□□ -1.54
SMC4-223ENST00000493695 SLC46A1Q96NT5 459 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 GLOD4Q9HC38 313 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 FEZ2Q9UHY8 353 aaPredicted RBP5.45□□□□□ -1.54
SMC4-223ENST00000493695 SERPINB13Q9UIV8 391 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 ADAMTS5Q9UNA0 930 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 POLHQ9Y253 713 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 WDR17Q8IZU2 1322 aa5.45□□□□□ -1.54
SMC4-223ENST00000493695 NT5C1B-RDH14C9J2C7 533 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 INSIG1O15503 277 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 PCDHGA12O60330 932 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 SCP2P22307 547 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 PRDX5P30044 214 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 GPSM2P81274 684 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 SP2Q02086 613 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 GTF2H3Q13889 308 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 KIF22Q14807 665 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 Q4G0T1 1027 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 CCDC157Q569K6 752 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 R3HDM4Q96D70 268 aa5.44□□□□□ -1.54
SMC4-223ENST00000493695 MTMR8Q96EF0 704 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms