RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 IRF2BPLQ9H1B7 796 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 PREBQ9HCU5 417 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 TOPORSQ9NS56 1045 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 BAIAP2L1Q9UHR4 511 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 GINS2Q9Y248 185 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 SSU72P8A0A1W2PR75 194 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 DPPA5A6NC42 116 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 CFAP73A6NFT4 308 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 CSDE1O75534 798 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 FAM107AO95990 144 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 TNNC2P02585 160 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 CHRNA1P02708 482 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 SERPING1P05155 500 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 MMEP08473 750 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 TROVE2P10155 538 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ACTN1P12814 892 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ALADP13716 330 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 FGFR4P22455 802 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 CCND1P24385 295 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 CYLC1P35663 651 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 THPOP40225 353 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 PRKCIP41743 596 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 STAT1P42224 750 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ABL2P42684 1182 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 OXCT1P55809 520 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 WNT7BP56706 349 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 MTFR1Q15390 333 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ASIC2Q16515 512 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 DUOXA2Q1HG44 320 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 TDRD10Q5VZ19 366 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 IQCEQ6IPM2 695 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 WDR59Q6PJI9 974 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 KDM7AQ6ZMT4 941 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 NLRP14Q86W24 1093 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ANKRD13BQ86YJ7 626 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ANKLE1Q8NAG6 615 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 TAF4BQ92750 862 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 WNT8BQ93098 351 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ZNF653Q96CK0 615 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 DEFB118Q96PH6 123 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 POP1Q99575 1024 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 NRDE2Q9H7Z3 1164 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 ERVK-5Q9HDB9 667 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 NLRC4Q9NPP4 1024 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 QPCTLQ9NXS2 382 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 DNAJC12Q9UKB3 198 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 PIN4Q9Y237 131 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 NOC2LQ9Y3T9 749 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 SLC4A7Q9Y6M7 1214 aa7.66□□□□□ -1.18
SMARCE1-211ENST00000493660 PTPRJQ12913 1337 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 HLA-DRAP01903 254 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 GSTA1P08263 222 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 TMEM191BP0C7N4 346 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 CXCL8P10145 99 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 LSP1P33241 339 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 CA8P35219 290 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 PIK3CAP42336 1068 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 YARSP54577 528 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 MFAP3P55082 362 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 GCNT1Q02742 428 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 LMNB2Q03252 620 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 KIF5AQ12840 1032 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 FBXO47Q5MNV8 452 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 UBXN11Q5T124 520 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 ALS2CLQ60I27 953 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 HOOK3Q86VS8 718 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 HACE1Q8IYU2 909 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 MYCBPAPQ8TBZ2 947 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 TAS1R2Q8TE23 839 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 CTNNBL1Q8WYA6 563 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 RUBCNQ92622 972 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 MAK16Q9BXY0 300 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 RABEP2Q9H5N1 569 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 C1orf112Q9NSG2 853 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 TRMT13Q9NUP7 481 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 ZNF148Q9UQR1 794 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 L3MBTL1Q9Y468 752 aa7.65□□□□□ -1.18
SMARCE1-211ENST00000493660 LACTBL1A8MY62 500 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 EIF3FO00303 357 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 TLR3O15455 904 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 GFPT2O94808 682 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SGPL1O95470 568 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 VNN1O95497 513 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 CD4P01730 458 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 TBXAS1P24557 533 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SOX5P35711 763 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 PDCLQ13371 301 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 BIRC3Q13489 604 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 BFSP2Q13515 415 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 RAPGEF1Q13905 1077 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SLC10A6Q3KNW5 377 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SEZ6Q53EL9 994 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 XKR4Q5GH76 650 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 C1orf53Q5VUE5 145 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 PHLDB3Q6NSJ2 640 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 CDR2LQ86X02 465 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 ERICH1Q86X53 443 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms