RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PCDHB5Q9Y5E4 795 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 CCDC163A0A0D9SF12 145 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 KPNA7A9QM74 516 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
SAMM50-205ENST00000493621 TRDMT1O14717 391 aaKnown RBP13.3□□□□□ -0.28
SAMM50-205ENST00000493621 RNF40O75150 1001 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 ARSAP15289 507 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
SAMM50-205ENST00000493621 PLCG1P19174 1290 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 DDX6P26196 483 aaKnown RBP eCLIP13.3□□□□□ -0.28
SAMM50-205ENST00000493621 ABCD1P33897 745 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 GPR15P49685 360 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 LIMK1P53667 647 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
SAMM50-205ENST00000493621 N4BP2L1Q5TBK1 243 aaPredicted RBP13.3□□□□□ -0.28
SAMM50-205ENST00000493621 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 SLFN12LQ6IEE8 588 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 EFCAB13Q8IY85 973 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 RASSF8Q8NHQ8 419 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 RAD54LQ92698 747 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 IKZF4Q9H2S9 585 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 SMOC1Q9H4F8 434 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 KIF9Q9HAQ2 790 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 TDP1Q9NUW8 608 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 ANAPC1Q9H1A4 1944 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 LAMA1P25391 3075 aa13.3□□□□□ -0.28
SAMM50-205ENST00000493621 PRPF40AO75400 957 aaKnown RBP13.29□□□□□ -0.28
SAMM50-205ENST00000493621 GJB2P29033 226 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 GALK1P51570 392 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 AMPD2Q01433 879 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 TSPY1Q01534 308 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 SV2CQ496J9 727 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 STPG1Q5TH74 334 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 CC2D1AQ6P1N0 951 aaPredicted RBP13.29□□□□□ -0.28
SAMM50-205ENST00000493621 TTC16Q8NEE8 873 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 MRPS31Q92665 395 aaKnown RBP13.29□□□□□ -0.28
SAMM50-205ENST00000493621 HHIPQ96QV1 700 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 FBRSL1Q9HCM7 1045 aaKnown RBP13.29□□□□□ -0.28
SAMM50-205ENST00000493621 ANGPTL2Q9UKU9 493 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 STYXL1Q9Y6J8 313 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 HELZP42694 1942 aaKnown RBP13.29□□□□□ -0.28
SAMM50-205ENST00000493621 NUP205Q92621 2012 aa13.29□□□□□ -0.28
SAMM50-205ENST00000493621 TM4SF5O14894 197 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 AKAP3O75969 853 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 IL18RAPO95256 599 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 CSH1P0DML2 217 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 CSH2P0DML3 217 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 DRD1P21728 446 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 MPLP40238 635 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 GRIN1Q05586 938 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 PDGFRLQ15198 375 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 DDR2Q16832 855 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 PLA2G2CQ5R387 149 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 NAIF1Q69YI7 327 aaPredicted RBP13.28□□□□□ -0.28
SAMM50-205ENST00000493621 CRELD2Q6UXH1 353 aaPredicted RBP13.28□□□□□ -0.28
SAMM50-205ENST00000493621 MON1AQ86VX9 555 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 CAMKK1Q8N5S9 505 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 POMGNT1Q8WZA1 660 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
SAMM50-205ENST00000493621 ZC3H10Q96K80 434 aaKnown RBP13.28□□□□□ -0.28
SAMM50-205ENST00000493621 ZNF560Q96MR9 790 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 P2RY13Q9BPV8 354 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 ST6GALNAC4Q9H4F1 302 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 PCDHGA5Q9Y5G8 931 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 CHD6Q8TD26 2715 aa13.28□□□□□ -0.28
SAMM50-205ENST00000493621 SOBPA7XYQ1 873 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 CYP2F1P24903 491 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 PMLP29590 882 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.29
SAMM50-205ENST00000493621 GJA4P35212 333 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 LONP1P36776 959 aaKnown RBP13.27□□□□□ -0.29
SAMM50-205ENST00000493621 ZNF268Q14587 947 aaPredicted RBP13.27□□□□□ -0.29
SAMM50-205ENST00000493621 MTF1Q14872 753 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 NFE2Q16621 373 aaPredicted RBP13.27□□□□□ -0.29
SAMM50-205ENST00000493621 PLK5Q496M5 336 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 SFR1Q86XK3 245 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 PDCL2Q8N4E4 241 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 CPA6Q8N4T0 437 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 KRI1Q8N9T8 703 aaKnown RBP13.27□□□□□ -0.29
SAMM50-205ENST00000493621 RPLP0P6Q8NHW5 317 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 TMX3Q96JJ7 454 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 TRPC7Q9HCX4 862 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 VPS45Q9NRW7 570 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 AGAP1Q9UPQ3 857 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 THADAQ6YHU6 1953 aa13.27□□□□□ -0.29
SAMM50-205ENST00000493621 DCLK1O15075 740 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 TADA3O75528 432 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 NOL4O94818 638 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 ITGB3P05106 788 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 ACAT1P24752 427 aaKnown RBP13.26□□□□□ -0.29
SAMM50-205ENST00000493621 ADSSP30520 456 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 PNPLA4P41247 253 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 IFNAR2P48551 515 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 WNT7BP56706 349 aa13.26□□□□□ -0.29
SAMM50-205ENST00000493621 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms