RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TOR1BO14657 336 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 SGTAO43765 313 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 NDUFS2O75306 463 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 TSPY4P0CV99 314 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 TSPY10P0CW01 314 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 HSPA1LP34931 641 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 ZNF81P51508 661 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 SLC16A1P53985 500 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 NXPH1P58417 271 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 EXOSC10Q01780 885 aaKnown RBP4.23□□□□□ -1.73
PTCD3-218ENST00000493430 ITIH3Q06033 890 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 PIGFQ07326 219 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 HLXQ14774 488 aaPredicted RBP4.23□□□□□ -1.73
PTCD3-218ENST00000493430 FAM153CQ494X1 144 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 GIMAP6Q6P9H5 292 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 PGM2L1Q6PCE3 622 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 CFAP52Q8N1V2 620 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 NSUN7Q8NE18 718 aaKnown RBP4.23□□□□□ -1.73
PTCD3-218ENST00000493430 MYCBPAPQ8TBZ2 947 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 HAPLN3Q96S86 360 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 IMPG2Q9BZV3 1241 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 WNT6Q9Y6F9 365 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 SETBP1Q9Y6X0 1596 aa4.23□□□□□ -1.73
PTCD3-218ENST00000493430 ARHGAP31Q2M1Z3 1444 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 ADAMTS13Q76LX8 1427 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 LRP6O75581 1613 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 LINC00473A8K010 186 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 E7ENX8 843 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 GCOM1H8Y6P7 765 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-218ENST00000493430 PRKCGP05129 697 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 CD1AP06126 327 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 ELFN1P0C7U0 828 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 PPP3CBP16298 524 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 ZNF280AP59817 542 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-218ENST00000493430 POU6F2P78424 691 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-218ENST00000493430 TAP2Q03519 686 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 IDI1Q13907 227 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 RAB39AQ14964 217 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 ACAP2Q15057 778 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 TXNRD1Q16881 649 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 FLYWCH1Q4VC44 716 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 FCRLBQ6BAA4 426 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 GADL1Q6ZQY3 521 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 ZNF365Q70YC5 407 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 C1QL2Q7Z5L3 287 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 PDPRQ8NCN5 879 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 B3GALNT2Q8NCR0 500 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 SLC17A8Q8NDX2 589 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 JADE3Q92613 823 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 DPF1Q92782 380 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 C1QTNF7Q9BXJ2 289 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 PUS7LQ9H0K6 701 aaKnown RBP4.22□□□□□ -1.73
PTCD3-218ENST00000493430 TMX1Q9H3N1 280 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 KLC4Q9NSK0 619 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 MKS1Q9NXB0 559 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.22□□□□□ -1.73
PTCD3-218ENST00000493430 ST3GAL5Q9UNP4 418 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 IQSEC2Q5JU85 1478 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 QRICH2Q9H0J4 1663 aa4.22□□□□□ -1.73
PTCD3-218ENST00000493430 WIPF3A6NGB9 483 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 ANXA1P04083 346 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 CELA2AP08217 269 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 ITPKBP27987 946 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 MC2RQ01718 297 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 SRSF7Q16629 238 aaKnown RBP eCLIP4.21□□□□□ -1.74
PTCD3-218ENST00000493430 PPP4R3AQ6IN85 833 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 TMPRSS9Q7Z410 1059 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 AMIGO2Q86SJ2 522 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 CNTD1Q8N815 330 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 TMIEQ8NEW7 156 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 DDB2Q92466 427 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 LRIG1Q96JA1 1093 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 CLPTM1LQ96KA5 538 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 ZNF778Q96MU6 729 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 TRIB1Q96RU8 372 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 SMOQ99835 787 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 SLC5A4Q9NY91 659 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 CALCOCO1Q9P1Z2 691 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 MCM8Q9UJA3 840 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 TUBD1Q9UJT1 453 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 SLC45A2Q9UMX9 530 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 PRKAB1Q9Y478 270 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 KANK1Q14678 1352 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 TMEM2Q9UHN6 1383 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 RGPD2P0DJD1 1756 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 WNK3Q9BYP7 1800 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 ITSN1Q15811 1721 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 TRPM3Q9HCF6 1732 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-218ENST00000493430 AOX1Q06278 1338 aa4.21□□□□□ -1.74
PTCD3-218ENST00000493430 AKAP12Q02952 1782 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 RPRD2Q5VT52 1461 aaKnown RBP4.2□□□□□ -1.74
PTCD3-218ENST00000493430 NUP155O75694 1391 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 TMEM94Q12767 1356 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 WDR27A2RRH5 827 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 WDR91A4D1P6 747 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 KLHL33A6NCF5 533 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 RPLP2P05387 115 aaKnown RBP4.2□□□□□ -1.74
PTCD3-218ENST00000493430 ITGB6P18564 788 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 NPTX2P47972 431 aa4.2□□□□□ -1.74
PTCD3-218ENST00000493430 EZH2Q15910 746 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms