RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 AGO2Q9UKV8 859 aaKnown RBP7.31□□□□□ -1.24
VPS52-219ENST00000493379 PCDHB12Q9Y5F1 795 aa7.31□□□□□ -1.24
VPS52-219ENST00000493379 DMXL2Q8TDJ6 3036 aa7.31□□□□□ -1.24
VPS52-219ENST00000493379 AKAP13Q12802 2813 aa7.31□□□□□ -1.24
VPS52-219ENST00000493379 PIEZO2Q9H5I5 2752 aa7.31□□□□□ -1.24
VPS52-219ENST00000493379 FNDC1Q4ZHG4 1894 aaPredicted RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 LACTBL1A8MY62 500 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 NRP1O14786 923 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 MAPK13O15264 365 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 GRM6O15303 877 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 EXTL3O43909 919 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 FGF18O76093 207 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 KIF20AO95235 890 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 RHOQP17081 205 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 BMP6P22004 513 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 SP100P23497 879 aaPredicted RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 DNAJB1P25685 340 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 MSX1P28360 303 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 PMLP29590 882 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 MLH1P40692 756 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 SLC11A1P49279 550 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 AARSP49588 968 aaKnown RBP eCLIP7.3□□□□□ -1.24
VPS52-219ENST00000493379 SCNN1GP51170 649 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 ARSDP51689 593 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 YARSP54577 528 aaKnown RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 DAB2P98082 770 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 HYAL1Q12794 435 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 ORC1Q13415 861 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 GPM6BQ13491 265 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 KCNC3Q14003 757 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 UPP1Q16831 310 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 EDRF1Q3B7T1 1238 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 ARSJQ5FYB0 599 aaPredicted RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 ZNF658Q5TYW1 1059 aaPredicted RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 SPATA1Q5VX52 437 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 CWF19L1Q69YN2 538 aaKnown RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 ALG1LQ6GMV1 187 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 RBM43Q6ZSC3 357 aaKnown RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 BTLAQ7Z6A9 289 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 THNSL1Q8IYQ7 743 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 TTC16Q8NEE8 873 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 CXorf38Q8TB03 319 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 GOLGA5Q8TBA6 731 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 RIN2Q8WYP3 895 aaPredicted RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 UROC1Q96N76 676 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 ZNF558Q96NG5 402 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 GBP4Q96PP9 640 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 TCHPQ9BT92 498 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 IKZF4Q9H2S9 585 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 IGFLR1Q9H665 355 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 AGPAT3Q9NRZ7 376 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 EXOC1Q9NV70 894 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 SLC38A7Q9NVC3 462 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 RMND1Q9NWS8 449 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 MARCH5Q9NX47 278 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 DNAJB4Q9UDY4 337 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 HOOK1Q9UJC3 728 aaKnown RBP7.3□□□□□ -1.24
VPS52-219ENST00000493379 FAN1Q9Y2M0 1017 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 C2CD2Q9Y426 696 aa7.3□□□□□ -1.24
VPS52-219ENST00000493379 ANO9A1A5B4 782 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 FAM187AA6NFU0 413 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 SRRM3A6NNA2 597 aaPredicted RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 TISP43B9A030 160 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 PIRO00625 290 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 EIF1AYO14602 144 aaKnown RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 NCK2O43639 380 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 IL18RAPO95256 599 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 SMC2O95347 1197 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 POMCP01189 267 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 SDHBP21912 280 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 CTNNB1P35222 781 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 PPP1R2P41236 205 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 TNFSF9P41273 254 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 KRT17Q04695 432 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 SOX4Q06945 474 aaPredicted RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 PNOCQ13519 176 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 MORC3Q14149 939 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 HSP90AA2PQ14568 343 aaPredicted RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 PAN2Q504Q3 1202 aaKnown RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 ZBTB41Q5SVQ8 909 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 DCLRE1AQ6PJP8 1040 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 TMEM184AQ6ZMB5 413 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 LRRC69Q6ZNQ3 347 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 TMEM173Q86WV6 379 aaPredicted RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 BRSK2Q8IWQ3 736 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 CCDC105Q8IYK2 499 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 MRPL43Q8N983 215 aaKnown RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 TRIML1Q8N9V2 468 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 RNF169Q8NCN4 708 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 FLCNQ8NFG4 579 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 POF1BQ8WVV4 589 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 POMGNT1Q8WZA1 660 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 CCDC47Q96A33 483 aaKnown RBP7.29□□□□□ -1.24
VPS52-219ENST00000493379 BICD1Q96G01 975 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 BORCS6Q96GS4 357 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 CBWD1Q9BRT8 395 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 MSTO1Q9BUK6 570 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 COLEC11Q9BWP8 271 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 VN1R3Q9BXE9 311 aa7.29□□□□□ -1.24
VPS52-219ENST00000493379 SEMA4AQ9H3S1 761 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms