RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 MBTPS2O43462 519 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 TBC1D4O60343 1298 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 RFPL2O75678 378 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 WEE2P0C1S8 567 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 PTPN2P17706 415 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 PTPN1P18031 435 aaKnown RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 SSTR3P32745 418 aaPredicted RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 LTBRP36941 435 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 GRIK1P39086 918 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 RAP1GAPP47736 663 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 CDH8P55286 799 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 PSMC1P62191 440 aaKnown RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 TWF1Q12792 350 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 DUSP4Q13115 394 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 CBX2Q14781 532 aaPredicted RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 ZNF638Q14966 1978 aaKnown RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 COL19A1Q14993 1142 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 EXOC3L4Q17RC7 722 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 ZSCAN23Q3MJ62 389 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 CBWD6Q4V339 395 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 VWA3BQ502W6 1294 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 TCP11X2Q5H9J9 407 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 MDH1BQ5I0G3 518 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 CBWD3Q5JTY5 395 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 CBWD5Q5RIA9 395 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 C1orf220Q5T0J3 134 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 LILRA6Q6PI73 481 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 RSPO2Q6UXX9 243 aaPredicted RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 GPR149Q86SP6 731 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 UNC93AQ86WB7 457 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 SCN4BQ8IWT1 228 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 EHBP1Q8NDI1 1231 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 OR10T2Q8NGX3 314 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 CXorf38Q8TB03 319 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 MS4A3Q96HJ5 214 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 FUBP3Q96I24 572 aaKnown RBP eCLIP8.67□□□□□ -1.023e-9■■■■□ 20.6
TM4SF1-204ENST00000493348 MSLNLQ96KJ4 702 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 BPIFA3Q9BQP9 254 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 MRPL45Q9BRJ2 306 aaKnown RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 ANP32EQ9BTT0 268 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 NT5C1AQ9BXI3 368 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 XYLT2Q9H1B5 865 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 NDST4Q9H3R1 872 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 ASAH2Q9NR71 780 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 SAMSN1Q9NSI8 373 aaKnown RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 EHD2Q9NZN4 543 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 HSFX1Q9UBD0 423 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 GTF3C4Q9UKN8 822 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 SLC27A5Q9Y2P5 690 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 COQ4Q9Y3A0 265 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 USP15Q9Y4E8 981 aaPredicted RBP8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 ASB3Q9Y575 518 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 INSL5Q9Y5Q6 135 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 EYSQ5T1H1 3165 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 PRUNE2Q8WUY3 3088 aa8.67□□□□□ -1.02
TM4SF1-204ENST00000493348 GRXCR2A6NFK2 248 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 GABRDO14764 452 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 TRIM66O15016 1216 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 FGF19O95750 216 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 SERPINC1P01008 464 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 GBP2P32456 591 aaPredicted RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 KCNQ1P51787 676 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 NDST1P52848 882 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 MFAP3P55082 362 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 CUL2Q13617 745 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 KCNC3Q14003 757 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 SMAD2Q15796 467 aaKnown RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 PABPC1LQ4VXU2 614 aaKnown RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 SYCE2Q6PIF2 218 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 PDZD4Q76G19 769 aaPredicted RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 ENOSF1Q7L5Y1 443 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 OTOP3Q7RTS5 596 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 OSTM1Q86WC4 334 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 TDRD5Q8NAT2 981 aaKnown RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 ATAD1Q8NBU5 361 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 LEMD2Q8NC56 503 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 MYCBPAPQ8TBZ2 947 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 KBTBD7Q8WVZ9 684 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 SEMA4DQ92854 862 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 MYLPFQ96A32 169 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 HEXIM2Q96MH2 286 aaKnown RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 TMEM209Q96SK2 561 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 CORO1BQ9BR76 489 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 CRACR2AQ9BSW2 395 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 PHF7Q9BWX1 381 aaPredicted RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 ELOVL4Q9GZR5 314 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 INTS2Q9H0H0 1204 aaKnown RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 VPS16Q9H269 839 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 SLITRK6Q9H5Y7 841 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 FANCLQ9NW38 375 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 TAB2Q9NYJ8 693 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 UXTQ9UBK9 157 aaPredicted RBP8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 PRKAG3Q9UGI9 489 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 METRNQ9UJH8 293 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 YIPF1Q9Y548 306 aa8.66□□□□□ -1.02
TM4SF1-204ENST00000493348 PCDHB4Q9Y5E5 795 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms