RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 LRRC38Q5VT99 294 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 ADAT2Q7Z6V5 191 aaKnown RBP14.85□□□□□ -0.03
PTPN7-216ENST00000492977 KATNAL2Q8IYT4 538 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 NIPA2Q8N8Q9 360 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 PRELID2Q8N945 189 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 IFT81Q8WYA0 676 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 MIS12Q9H081 205 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 SLC24A3Q9HC58 644 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 ERVK-5Q9HDB9 667 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 GDAP2Q9NXN4 497 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 KLK14Q9P0G3 267 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 PCYOX1Q9UHG3 505 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 CYTH4Q9UIA0 394 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 ST3GAL5Q9UNP4 418 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 UTP11Q9Y3A2 253 aaKnown RBP14.85□□□□□ -0.03
PTPN7-216ENST00000492977 ZSCAN5CA6NGD5 496 aaPredicted RBP14.85□□□□□ -0.03
PTPN7-216ENST00000492977 M0QYV0 167 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 PPEF2O14830 753 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 CABYRO75952 493 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 CHRNA1P02708 482 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 ELNP15502 786 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 GPD2P43304 727 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 DR1Q01658 176 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 MGAT3Q09327 533 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 FBXO47Q5MNV8 452 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 MAP3K21Q5TCX8 1036 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 SND1Q7KZF4 910 aaKnown RBP eCLIP14.85□□□□□ -0.03
PTPN7-216ENST00000492977 HACE1Q8IYU2 909 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 C12orf50Q8NA57 414 aaPredicted RBP14.85□□□□□ -0.03
PTPN7-216ENST00000492977 MAGOHBQ96A72 148 aaKnown RBP14.85□□□□□ -0.03
PTPN7-216ENST00000492977 MCEEQ96PE7 176 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 DNAI2Q9GZS0 605 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 RAB17Q9H0T7 212 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 HPCAL4Q9UM19 191 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 NFU1Q9UMS0 254 aa14.85□□□□□ -0.03
PTPN7-216ENST00000492977 ESYT3A0FGR9 886 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 GPR182O15218 404 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 TTI1O43156 1089 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 GJB6O95452 261 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 GNRH1P01148 92 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 KRT3P12035 628 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 PSMC1P62191 440 aaKnown RBP14.84□□□□□ -0.03
PTPN7-216ENST00000492977 CYP4A22Q5TCH4 519 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 EXD1Q8NHP7 514 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 FNIP1Q8TF40 1166 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 CPXM1Q96SM3 734 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 MRPL45Q9BRJ2 306 aaKnown RBP14.84□□□□□ -0.03
PTPN7-216ENST00000492977 PLEKHA4Q9H4M7 779 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 SYNCQ9H7C4 482 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 FAM114A2Q9NRY5 505 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 RASAL2Q9UJF2 1139 aa14.84□□□□□ -0.03
PTPN7-216ENST00000492977 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-216ENST00000492977 KPNA7A9QM74 516 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 FAM163BP0C2L3 166 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 RARAP10276 462 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 LRPAP1P30533 357 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 CETN2P41208 172 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 FNTAP49354 379 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 AARSP49588 968 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTPN7-216ENST00000492977 TAF6P49848 677 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 DRG2P55039 364 aaKnown RBP14.83□□□□□ -0.04
PTPN7-216ENST00000492977 TAS2R40P59535 323 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 PDCLQ13371 301 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 SIX1Q15475 284 aaPredicted RBP14.83□□□□□ -0.04
PTPN7-216ENST00000492977 PTGISQ16647 500 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 SOWAHAQ2M3V2 549 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 SV2CQ496J9 727 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 LIMS2Q7Z4I7 341 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 RNF180Q86T96 592 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 XYLT1Q86Y38 959 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 RCOR2Q8IZ40 523 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 ZDHHC14Q8IZN3 488 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 ARRDC4Q8NCT1 418 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 PXYLP1Q8TE99 480 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 WNT8BQ93098 351 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 MCRS1Q96EZ8 462 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 LRRC19Q9H756 370 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 FAM105AQ9NUU6 356 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 DDX20Q9UHI6 824 aaKnown RBP14.83□□□□□ -0.04
PTPN7-216ENST00000492977 USTQ9Y2C2 406 aa14.83□□□□□ -0.04
PTPN7-216ENST00000492977 GRIN2DO15399 1336 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 PODXLO00592 558 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 TRPA1O75762 1119 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 ERBB2P04626 1255 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 SETSIPP0DME0 302 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 SSR1P43307 286 aaKnown RBP14.82□□□□□ -0.04
PTPN7-216ENST00000492977 ZNF252P-AS1Q0IIN9 211 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
PTPN7-216ENST00000492977 TRADDQ15628 312 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 CCDC137Q6PK04 289 aaKnown RBP14.82□□□□□ -0.04
PTPN7-216ENST00000492977 MREGQ8N565 214 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 OR6B3Q8NGW1 331 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 CD99L2Q8TCZ2 262 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 IPO4Q8TEX9 1081 aaKnown RBP14.82□□□□□ -0.04
PTPN7-216ENST00000492977 GDAP1L1Q96MZ0 367 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 PPP1R10Q96QC0 940 aaKnown RBP14.82□□□□□ -0.04
PTPN7-216ENST00000492977 ERP44Q9BS26 406 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 MED4Q9NPJ6 270 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 HOMER3Q9NSC5 361 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms