RNA–Protein interactions for RNA: ENST00000492244.5

FDPS-217, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-217ENST00000492244 TNK2Q07912 1038 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 DMWDQ09019 674 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 ZNF268Q14587 947 aaPredicted RBP12.69□□□□□ -0.38
FDPS-217ENST00000492244 ELF2Q15723 593 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 ST3GAL2Q16842 350 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 C11orf74Q86VG3 221 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 MAB21L3Q8N8X9 362 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 TMEM206Q9H813 350 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 GKN1Q9NS71 199 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 STK17AQ9UEE5 414 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 SMC3Q9UQE7 1217 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 STYXL1Q9Y6J8 313 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 ANK1P16157 1881 aa12.69□□□□□ -0.38
FDPS-217ENST00000492244 PRPF40AO75400 957 aaKnown RBP12.68□□□□□ -0.38
FDPS-217ENST00000492244 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 GAP43P17677 238 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 PCSK1P29120 753 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 NR1H3Q13133 447 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
FDPS-217ENST00000492244 ALCAMQ13740 583 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 MCM6Q14566 821 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 WSCD1Q658N2 575 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 SLC39A4Q6P5W5 647 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 LRRC52Q8N7C0 313 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 GIPC2Q8TF65 315 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
FDPS-217ENST00000492244 LRRC3BQ96PB8 259 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 KIF2CQ99661 725 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 ACBD6Q9BR61 282 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 EHD2Q9NZN4 543 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 ANGPTL2Q9UKU9 493 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 CEP295Q9C0D2 2601 aa12.68□□□□□ -0.38
FDPS-217ENST00000492244 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 EXTL3O43909 919 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 RHOBTB1O94844 696 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 USP17L7P0C7H9 530 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
FDPS-217ENST00000492244 DDIT3P35638 169 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 IFNAR2P48551 515 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 TFAMQ00059 246 aaKnown RBP12.67□□□□□ -0.38
FDPS-217ENST00000492244 FAM160A1Q05DH4 1040 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 MON1AQ86VX9 555 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
FDPS-217ENST00000492244 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
FDPS-217ENST00000492244 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 P2RY13Q9BPV8 354 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 ARRDC1-AS1Q9H2J1 176 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 EBF3Q9H4W6 596 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
FDPS-217ENST00000492244 VPS45Q9NRW7 570 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 BLOC1S4Q9NUP1 217 aa12.67□□□□□ -0.38
FDPS-217ENST00000492244 MAGED2Q9UNF1 606 aaPredicted RBP12.67□□□□□ -0.38
FDPS-217ENST00000492244 SDK1Q7Z5N4 2213 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 AXIN1O15169 862 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 RNF40O75150 1001 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 APBB3O95704 486 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 CKMP06732 381 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 PDCP20941 246 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 MPLP40238 635 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 RAP1GAPP47736 663 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 LHX1P48742 406 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 MYO1EQ12965 1108 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 KCNB1Q14721 858 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 MTF1Q14872 753 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
FDPS-217ENST00000492244 ZC2HC1CQ53FD0 456 aaPredicted RBP12.66□□□□□ -0.38
FDPS-217ENST00000492244 LARP1BQ659C4 914 aaKnown RBP12.66□□□□□ -0.38
FDPS-217ENST00000492244 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 SYT13Q7L8C5 426 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 ZNF720Q7Z2F6 126 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 SPATA2LQ8IUW3 424 aaPredicted RBP12.66□□□□□ -0.38
FDPS-217ENST00000492244 BRSK2Q8IWQ3 736 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 SYCP3Q8IZU3 236 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 ZC3H10Q96K80 434 aaKnown RBP12.66□□□□□ -0.38
FDPS-217ENST00000492244 CEP295NLQ96MC4 621 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 ACCSQ96QU6 501 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 FIZ1Q96SL8 496 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
FDPS-217ENST00000492244 TRPC7Q9HCX4 862 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 HPS4Q9NQG7 708 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 RBAKQ9NYW8 714 aaPredicted RBP12.66□□□□□ -0.38
FDPS-217ENST00000492244 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
FDPS-217ENST00000492244 OBSL1O75147 1896 aa12.65□□□□□ -0.38
FDPS-217ENST00000492244 USP24Q9UPU5 2620 aa12.65□□□□□ -0.38
FDPS-217ENST00000492244 ANKRD63C9JTQ0 380 aa12.65□□□□□ -0.38
FDPS-217ENST00000492244 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
FDPS-217ENST00000492244 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
FDPS-217ENST00000492244 GDF9O60383 454 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms