RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CRISPLD1Q9H336 500 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 KBTBD4Q9NVX7 518 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 DDX43Q9NXZ2 648 aaKnown RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 ABI2Q9NYB9 513 aaPredicted RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 FAM13BQ9NYF5 915 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 TBC1D7Q9P0N9 293 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 CFAP45Q9UL16 551 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 RAB23Q9ULC3 237 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 NDRG2Q9UN36 371 aaKnown RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 AGAP1Q9UPQ3 857 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 MTF2Q9Y483 593 aaPredicted RBP9.41□□□□□ -0.9
NUP50-217ENST00000491860 COL4A2P08572 1712 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 DENND4CQ5VZ89 1909 aa9.41□□□□□ -0.9
NUP50-217ENST00000491860 ACACBO00763 2458 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 MYBPHLA2RUH7 354 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 PRR5-ARHGAP8B1AHC4 643 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 TISP43B9A030 160 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 FOXD2O60548 495 aaPredicted RBP9.4□□□□□ -0.9
NUP50-217ENST00000491860 LRRN2O75325 713 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 PAPSS2O95340 614 aaPredicted RBP9.4□□□□□ -0.9
NUP50-217ENST00000491860 KRT19P08727 400 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 PFKLP17858 780 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 ATF6P18850 670 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 CXCL12P48061 93 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 ARHGAP8P85298 464 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 BFSP1Q12934 665 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 MTAPQ13126 283 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
NUP50-217ENST00000491860 ITPRIPL2Q3MIP1 535 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 CFAP221Q4G0U5 840 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 INTS6LQ5JSJ4 861 aaKnown RBP9.4□□□□□ -0.9
NUP50-217ENST00000491860 CC2D1AQ6P1N0 951 aaPredicted RBP9.4□□□□□ -0.9
NUP50-217ENST00000491860 FAM173BQ6P4H8 233 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 POTEHQ6S545 545 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 GAREM2Q75VX8 874 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 SPATA2LQ8IUW3 424 aaPredicted RBP9.4□□□□□ -0.9
NUP50-217ENST00000491860 WDR49Q8IV35 697 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 CMTM8Q8IZV2 173 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 PDCL2Q8N4E4 241 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 SPEM1Q8N4L4 309 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 PDILTQ8N807 584 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 CCDC26Q8TAB7 109 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 SAAL1Q96ER3 474 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 TRMT2BQ96GJ1 504 aaKnown RBP9.4□□□□□ -0.9
NUP50-217ENST00000491860 FNBP1Q96RU3 617 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 TMEM209Q96SK2 561 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 TRIM9Q9C026 710 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 LMAN1LQ9HAT1 526 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 INTS13Q9NVM9 706 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 NCDNQ9UBB6 729 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 GMEB2Q9UKD1 530 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 L1RE1Q9UN81 338 aa9.4□□□□□ -0.9
NUP50-217ENST00000491860 TPRP12270 2363 aaKnown RBP9.39□□□□□ -0.91
NUP50-217ENST00000491860 PVALEFA0A1B0GWK0 134 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 SPECC1L-ADORA2AF8WAN1 911 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 GABRDO14764 452 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 ATG13O75143 517 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 PRPF6O94906 941 aaKnown RBP9.39□□□□□ -0.91
NUP50-217ENST00000491860 CCNE1P24864 410 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 CTHP32929 405 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 MAGEA11P43364 429 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 PPP3CCP48454 512 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 CASP5P51878 434 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
NUP50-217ENST00000491860 ASIC1P78348 528 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 LMNB2Q03252 620 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 KCNA1Q09470 495 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 FZD5Q13467 585 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 FAM26FQ5R3K3 315 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 VSTM1Q6UX27 236 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 UNC13DQ70J99 1090 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 LRRTM3Q86VH5 581 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 ADGRF2Q8IZF7 708 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 KIAA1958Q8N8K9 716 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 GOLGA5Q8TBA6 731 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 NOC3LQ8WTT2 800 aaKnown RBP9.39□□□□□ -0.91
NUP50-217ENST00000491860 MYRFLQ96LU7 910 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 C7orf25Q9BPX7 421 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 LPIN3Q9BQK8 851 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 CBWD1Q9BRT8 395 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 MKNK1Q9BUB5 465 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 PANK2Q9BZ23 570 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 IL21Q9HBE4 155 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 PDE11AQ9HCR9 933 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 HSPBP1Q9NZL4 362 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 CDH9Q9ULB4 789 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 SMG5Q9UPR3 1016 aaKnown RBP9.39□□□□□ -0.91
NUP50-217ENST00000491860 SNX9Q9Y5X1 595 aa9.39□□□□□ -0.91
NUP50-217ENST00000491860 A0A087X0B3 334 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
NUP50-217ENST00000491860 LRP3O75074 770 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 SOAT2O75908 522 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 NOL4O94818 638 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 MYL1P05976 194 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
NUP50-217ENST00000491860 CHRNB1P11230 501 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 HMGA1P17096 107 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms