RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 APOBEC3GQ9HC16 384 aaKnown RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 HCFC1R1Q9NWW0 138 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 RAB20Q9NX57 234 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 GTF3C4Q9UKN8 822 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 NME7Q9Y5B8 376 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 PCDHB5Q9Y5E4 795 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 BDP1A6H8Y1 2624 aa13.71□□□□□ -0.22
LIMK1-207ENST00000491052 XIRP2A4UGR9 3374 aa13.71□□□□□ -0.22
LIMK1-207ENST00000491052 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 PAPLNO95428 1278 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
LIMK1-207ENST00000491052 POU2F2P09086 479 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 FAM163BP0C2L3 166 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 ALDH1A3P47895 512 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 EPHB3P54753 998 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 NTHL1P78549 312 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 TYRO3Q06418 890 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 CETN1Q12798 172 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 KCNH2Q12809 1159 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
LIMK1-207ENST00000491052 HSP90AA4PQ58FG1 418 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 MDH1BQ5I0G3 518 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 GET4Q7L5D6 327 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-207ENST00000491052 SPATA2LQ8IUW3 424 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-207ENST00000491052 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 MYLPFQ96A32 169 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 PKMYT1Q99640 499 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-207ENST00000491052 DNAJC25Q9H1X3 360 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 DPEP3Q9H4B8 488 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 THAP9Q9H5L6 903 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 WDR6Q9NNW5 1121 aaKnown RBP13.7□□□□□ -0.22
LIMK1-207ENST00000491052 CRTAC1Q9NQ79 661 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 NR2E1Q9Y466 385 aa13.7□□□□□ -0.22
LIMK1-207ENST00000491052 HELZP42694 1942 aaKnown RBP13.7□□□□□ -0.22
LIMK1-207ENST00000491052 SPTBN5Q9NRC6 3674 aaKnown RBP13.69□□□□□ -0.22
LIMK1-207ENST00000491052 CD58P19256 250 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 FSHRP23945 695 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 TUFMP49411 452 aaKnown RBP13.69□□□□□ -0.22
LIMK1-207ENST00000491052 NDST1P52848 882 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 CYP27A1Q02318 531 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 LRMPQ12912 555 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 ORC1Q13415 861 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 PABPC1LQ4VXU2 614 aaKnown RBP13.69□□□□□ -0.22
LIMK1-207ENST00000491052 IQCEQ6IPM2 695 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 C4orf50Q6ZRC1 276 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 IRF2BP1Q8IU81 584 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 TDRD5Q8NAT2 981 aaKnown RBP13.69□□□□□ -0.22
LIMK1-207ENST00000491052 B3GALNT2Q8NCR0 500 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-207ENST00000491052 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 BCO2Q9BYV7 579 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 CYP3A43Q9HB55 503 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 CEP72Q9P209 647 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 COQ4Q9Y3A0 265 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 NFE2L3Q9Y4A8 694 aa13.69□□□□□ -0.22
LIMK1-207ENST00000491052 P4HA2O15460 535 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 RHOP08100 348 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 HAPLN1P10915 354 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-207ENST00000491052 PTPN2P17706 415 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 PTPN1P18031 435 aaKnown RBP13.68□□□□□ -0.22
LIMK1-207ENST00000491052 CYP2F1P24903 491 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 GBP2P32456 591 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-207ENST00000491052 FAM171BQ6P995 826 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 ACOT1Q86TX2 421 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 GJD3Q8N144 294 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 MYCBPAPQ8TBZ2 947 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 ENOX1Q8TC92 643 aaKnown RBP13.68□□□□□ -0.22
LIMK1-207ENST00000491052 TATDN2Q93075 761 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 ACSF2Q96CM8 615 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-207ENST00000491052 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 TNIP3Q96KP6 325 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 NT5C1BQ96P26 610 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 ARID3AQ99856 593 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 LPIN3Q9BQK8 851 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 ABCB6Q9NP58 842 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 ASAH2Q9NR71 780 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
LIMK1-207ENST00000491052 DNMT3BQ9UBC3 853 aaKnown RBP13.68□□□□□ -0.22
LIMK1-207ENST00000491052 HMGXB4Q9UGU5 601 aa13.68□□□□□ -0.22
LIMK1-207ENST00000491052 C19orf67A6NJJ6 358 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 KCNJ18B7U540 433 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 C2CD4DB7Z1M9 353 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 LOC730098B7Z3J9 87 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 MYL4P12829 197 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-207ENST00000491052 ATF6P18850 670 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 TRIM21P19474 475 aaKnown RBP13.67□□□□□ -0.22
LIMK1-207ENST00000491052 BDNFP23560 247 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 MYL5Q02045 173 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 INCA1Q0VD86 236 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 KCNJ12Q14500 433 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 TAF12Q16514 161 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 MAN2A1Q16706 1144 aa13.67□□□□□ -0.22
LIMK1-207ENST00000491052 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-207ENST00000491052 CFAP221Q4G0U5 840 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms