RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ZCWPW1Q9H0M4 648 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 FNIP2Q9P278 1114 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 IRAK3Q9Y616 596 aa19.81■□□□□ 0.76
MCF2L-230ENST00000491028 THAP12O43422 761 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 LILRB3O75022 631 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 PTMAP06454 111 aaKnown RBP19.8■□□□□ 0.76
MCF2L-230ENST00000491028 PSMC1P62191 440 aaKnown RBP19.8■□□□□ 0.76
MCF2L-230ENST00000491028 SMARCB1Q12824 385 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 SMC1AQ14683 1233 aaKnown RBP19.8■□□□□ 0.76
MCF2L-230ENST00000491028 TDRD12Q587J7 1177 aaKnown RBP19.8■□□□□ 0.76
MCF2L-230ENST00000491028 HGSNATQ68CP4 663 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 ARHGAP17Q68EM7 881 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 FAM171BQ6P995 826 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 WDR59Q6PJI9 974 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 MYCBPAPQ8TBZ2 947 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 ARNTL2Q8WYA1 636 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 PKMYT1Q99640 499 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 TCF25Q9BQ70 676 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 RXFP1Q9HBX9 757 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 NGRNQ9NPE2 291 aaKnown RBP19.8■□□□□ 0.76
MCF2L-230ENST00000491028 CRTAC1Q9NQ79 661 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 ENTPD7Q9NQZ7 604 aa19.8■□□□□ 0.76
MCF2L-230ENST00000491028 NOCTQ9UK39 431 aaKnown RBP19.8■□□□□ 0.76
MCF2L-230ENST00000491028 C2CD2LO14523 706 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 FSCN2O14926 492 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 GRM6O15303 877 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 ATP2C2O75185 946 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 BRD2P25440 801 aaKnown RBP19.79■□□□□ 0.76
MCF2L-230ENST00000491028 ANXA13P27216 316 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 NFE2Q16621 373 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-230ENST00000491028 MDH1BQ5I0G3 518 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 NOP9Q86U38 636 aaKnown RBP19.79■□□□□ 0.76
MCF2L-230ENST00000491028 GPIHBP1Q8IV16 184 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 ZNF606Q8WXB4 792 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 DDX1Q92499 740 aaKnown RBP19.79■□□□□ 0.76
MCF2L-230ENST00000491028 TMEM209Q96SK2 561 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 HAUS4Q9H6D7 363 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 ACP6Q9NPH0 428 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 CDY1Q9Y6F8 540 aa19.79■□□□□ 0.76
MCF2L-230ENST00000491028 ATP8B3O60423 1300 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 PTPRDP23468 1912 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.78■□□□□ 0.76
MCF2L-230ENST00000491028 SSU72P8A0A1W2PR75 194 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 MYBPHLA2RUH7 354 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 O00370 1275 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 NRDCO43847 1150 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 LPXNO60711 386 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CPB1P15086 417 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 DNAJB1P25685 340 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 NDUFV1P49821 464 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 ERVFC1P60507 584 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CDR2Q01850 454 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 GPR17Q13304 367 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CNGA2Q16280 664 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 C4orf50Q6ZRC1 276 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 VPS36Q86VN1 386 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 C12orf29Q8N999 325 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CCDC112Q8NEF3 446 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 C2orf15Q8WU43 125 aaKnown RBP19.78■□□□□ 0.76
MCF2L-230ENST00000491028 TFAP2BQ92481 460 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CYFIP2Q96F07 1278 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 HNRNPABQ99729 332 aaKnown RBP19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CLSTN3Q9BQT9 956 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 SYT11Q9BT88 431 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CERS4Q9HA82 394 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 FAM49BQ9NUQ9 324 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 ARHGAP20Q9P2F6 1191 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 GTF3C4Q9UKN8 822 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 PCDHGC3Q9UN70 934 aa19.78■□□□□ 0.76
MCF2L-230ENST00000491028 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.78■□□□□ 0.76
MCF2L-230ENST00000491028 CXCL14O95715 111 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 SKILP12757 684 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
MCF2L-230ENST00000491028 PPP1R26Q5T8A7 1209 aaPredicted RBP19.77■□□□□ 0.76
MCF2L-230ENST00000491028 LCLAT1Q6UWP7 414 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 RSPO2Q6UXX9 243 aaPredicted RBP19.77■□□□□ 0.76
MCF2L-230ENST00000491028 CYP26C1Q6V0L0 522 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 TMTC1Q8IUR5 882 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 LRRC8AQ8IWT6 810 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 SLC20A1Q8WUM9 679 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 AUTS2Q8WXX7 1259 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 MYLPFQ96A32 169 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 PCED1BQ96HM7 432 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 FUBP3Q96I24 572 aaKnown RBP eCLIP19.77■□□□□ 0.76
MCF2L-230ENST00000491028 BAG1Q99933 345 aaPredicted RBP19.77■□□□□ 0.76
MCF2L-230ENST00000491028 AGPAT1Q99943 283 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 EMILIN2Q9BXX0 1053 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 HESX1Q9UBX0 185 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 TSPAN16Q9UKR8 245 aa19.77■□□□□ 0.76
MCF2L-230ENST00000491028 ATG2AQ2TAZ0 1938 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 RANBP2P49792 3224 aaKnown RBP19.76■□□□□ 0.75
MCF2L-230ENST00000491028 CALCAP01258 141 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 ADH1AP07327 375 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 OR4Q2P0C623 313 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 CCDC130P13994 396 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 OR1D2P34982 312 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 CA8P35219 290 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 ROR1Q01973 937 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 CAMK1Q14012 370 aa19.76■□□□□ 0.75
MCF2L-230ENST00000491028 RAB33AQ14088 237 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms