RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 MTF1Q14872 753 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 PMS2CLQ68D20 193 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 ANO7Q6IWH7 933 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 CYP2U1Q7Z449 544 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 CCDC83Q8IWF9 413 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 ACDQ96AP0 544 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 PYM1Q9BRP8 204 aaKnown RBP16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 NTPCRQ9BSD7 190 aaKnown RBP16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 RPF1Q9H9Y2 349 aaKnown RBP16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 TRPC7Q9HCX4 862 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 TMLHEQ9NVH6 421 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 HSFX1Q9UBD0 423 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 TBX20Q9UMR3 447 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 CDX4O14627 284 aaPredicted RBP16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 KHNYNO15037 678 aaKnown RBP16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 HYAL3O43820 417 aaPredicted RBP16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 F11P03951 625 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 HAPLN1P10915 354 aaPredicted RBP16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 MAPK8P45983 427 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 TOB1P50616 345 aaPredicted RBP16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 ANAPC15P60006 121 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 RING1Q06587 406 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 PDIA5Q14554 519 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 CCDC142Q17RM4 750 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 WSCD1Q658N2 575 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 ARMCX6Q7L4S7 300 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 TTC30AQ86WT1 665 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 CPA6Q8N4T0 437 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 CD101Q93033 1021 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 PNMA5Q96PV4 448 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 RAB34Q9BZG1 259 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 ECT2Q9H8V3 914 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 KIF9Q9HAQ2 790 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 EBF1Q9UH73 591 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 ATG2BQ96BY7 2078 aa16.56■□□□□ 0.24
SCAMP3-208ENST00000490999 CELSR3Q9NYQ7 3312 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 K7ENM7 598 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 CYB561D2O14569 222 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 OGTO15294 1046 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 CYP11A1P05108 521 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 DHPSP49366 369 aaPredicted RBP16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 NEK4P51957 841 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 NCKAP1LP55160 1127 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 TMEM132DQ14C87 1099 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 PDGFRLQ15198 375 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 FBXO43Q4G163 708 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 SPPL2BQ8TCT7 592 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 SLC22A12Q96S37 553 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 PI4K2AQ9BTU6 479 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 MSTO1Q9BUK6 570 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 TIPINQ9BVW5 301 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 DUS2Q9NX74 493 aaKnown RBP16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 KLK13Q9UKR3 277 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 LHX6Q9UPM6 363 aa16.55■□□□□ 0.24
SCAMP3-208ENST00000490999 TMEM8BA6NDV4 472 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 TISP43B9A030 160 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 PIRO00625 290 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 CEACAM1P13688 526 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 CSRP1P21291 193 aaKnown RBP16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 IFNAR2P48551 515 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 SLC12A3P55017 1021 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 IRX4P78413 519 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 AMPD2Q01433 879 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 USP4Q13107 963 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 ZNF77Q15935 545 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 C2orf27AQ580R0 203 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 SLC39A4Q6P5W5 647 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 MON1AQ86VX9 555 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 METTL23Q86XA0 190 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 MDGA1Q8NFP4 955 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 FBXO18Q8NFZ0 1043 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 OSCP1Q8WVF1 389 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 PIGKQ92643 395 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 CPSF3Q9UKF6 684 aaKnown RBP16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 STK24Q9Y6E0 443 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 KIAA1549LQ6ZVL6 1849 aa16.54■□□□□ 0.24
SCAMP3-208ENST00000490999 SPAARA0A1B0GVQ0 90 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 ANO9A1A5B4 782 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 PRPF40AO75400 957 aaKnown RBP16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 CKMP06732 381 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 PLA2G4BP0C869 781 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 DDX6P26196 483 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 ACOT2P49753 483 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 EML3Q32P44 896 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 ZC2HC1CQ53FD0 456 aaPredicted RBP16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 CCDC33Q8N5R6 958 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 RLN3Q8WXF3 142 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 CYP2S1Q96SQ9 504 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 FSCN3Q9NQT6 498 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 DSEQ9UL01 958 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 PCDHB5Q9Y5E4 795 aa16.53■□□□□ 0.24
SCAMP3-208ENST00000490999 OBSL1O75147 1896 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 GCN1Q92616 2671 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms