RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 ISCUQ9H1K1 167 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 FAM204AQ9H8W3 233 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 SPC25Q9HBM1 224 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 SLC38A10Q9HBR0 1119 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 KIAA1586Q9HCI6 787 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 AGO4Q9HCK5 861 aaKnown RBP5.42□□□□□ -1.54
PTPRK-213ENST00000490332 EPB41L5Q9HCM4 733 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 SIX2Q9NPC8 291 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 ST7Q9NRC1 585 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 KCNH7Q9NS40 1196 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 GOLGA6AQ9NYA3 693 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 APEX2Q9UBZ4 518 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 DMGDHQ9UI17 866 aaKnown RBP5.42□□□□□ -1.54
PTPRK-213ENST00000490332 CD207Q9UJ71 328 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 SALL4Q9UJQ4 1053 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 ZHX1Q9UKY1 873 aaPredicted RBP5.42□□□□□ -1.54
PTPRK-213ENST00000490332 MTUS1Q9ULD2 1270 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 ZMIZ1Q9ULJ6 1067 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 SAMM50Q9Y512 469 aa5.42□□□□□ -1.54
PTPRK-213ENST00000490332 ERICH4A6NGS2 130 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 TMCO5BA8MYB1 307 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 WDR64B1ANS9 1081 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 HMGB1P1B2RPK0 211 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 F8VZ95 297 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 K7ENM7 598 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 KRIT1O00522 736 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 DDX3XO00571 662 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 DHX15O43143 795 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CHMP2AO43633 222 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 HIP1RO75146 1068 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ZC3H11AO75152 810 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 RTN2O75298 545 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 PPFIA4O75335 1185 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 FTCDO95954 541 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ASGR1P07306 291 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ADH6P28332 368 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CCND2P30279 289 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CXCR5P32302 372 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 LTBRP36941 435 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 HSPA9P38646 679 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CYP2J2P51589 502 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 DRG2P55039 364 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 EIF3BP55884 814 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 BPIFB4P59827 614 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 GPC5P78333 572 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 MYL7Q01449 175 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 GUCY2DQ02846 1103 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 MTMR1Q13613 665 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 LRP8Q14114 963 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ENOX2Q16206 610 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ZC2HC1CQ53FD0 456 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CCSAPQ6IQ19 270 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 LBX2Q6XYB7 198 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 RNF207Q6ZRF8 634 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 HAUS6Q7Z4H7 955 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 SPRED2Q7Z698 418 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 DAAM2Q86T65 1068 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 NT5DC3Q86UY8 548 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CCDC105Q8IYK2 499 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ABRAQ8N0Z2 381 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 UBL4BQ8N7F7 174 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 MCPH1Q8NEM0 835 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 SYTL5Q8TDW5 730 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 MAIP1Q8WWC4 291 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CLEC4DQ8WXI8 215 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 IFT81Q8WYA0 676 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 DDX1Q92499 740 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 KCNN1Q92952 543 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ATP6V0A1Q93050 837 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 HES6Q96HZ4 224 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 FIZ1Q96SL8 496 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 KRT12Q99456 494 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 RAD9AQ99638 391 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 HNRNPABQ99729 332 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 PHF7Q9BWX1 381 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 MOV10L1Q9BXT6 1211 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ZCCHC2Q9C0B9 1178 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 RAB17Q9H0T7 212 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 CARD9Q9H257 536 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 MFSD1Q9H3U5 465 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 RBM12Q9NTZ6 932 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 PARP2Q9UGN5 583 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 FEZ2Q9UHY8 353 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 RASAL2Q9UJF2 1139 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 PPP1R9AQ9ULJ8 1098 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 UTP11Q9Y3A2 253 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 PCDHB11Q9Y5F2 797 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 PCDHA10Q9Y5I2 948 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 ARID1BQ8NFD5 2236 aaPredicted RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 LOC400499M0QZD8 3231 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 NCANO14594 1321 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 UMODL1Q5DID0 1318 aa5.41□□□□□ -1.54
PTPRK-213ENST00000490332 DSPP15924 2871 aaKnown RBP5.41□□□□□ -1.54
PTPRK-213ENST00000490332 LCHNA4D1U4 455 aa5.4□□□□□ -1.54
PTPRK-213ENST00000490332 LINC01553A4QN01 128 aa5.4□□□□□ -1.54
PTPRK-213ENST00000490332 EIF4E1BA6NMX2 242 aaKnown RBP5.4□□□□□ -1.54
PTPRK-213ENST00000490332 CYSRT1A8MQ03 144 aa5.4□□□□□ -1.54
PTPRK-213ENST00000490332 AGPSO00116 658 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms